Difference between revisions of "CPD0-1163"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-3962 RXN0-3962] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PPGPPMET-PWY PPGPPMET-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 T...")
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-3962 RXN0-3962] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PPGPPMET-PWY PPGPPMET-PWY] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
* ec number:
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* common name:
** [http://enzyme.expasy.org/EC/1.2.1.4 EC-1.2.1.4]
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** ppGpp biosynthesis
 
* Synonym(s):
 
* Synonym(s):
 +
** guanosine 3'-diphosphate 5'-diphosphate biosynthesis
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''3''' reactions found over '''6''' reactions in the full pathway
** 1 [[WATER]][c] '''+''' 1 [[ACETALD]][c] '''+''' 1 [[NADP]][c] '''=>''' 1 [[NADPH]][c] '''+''' 1 [[ACET]][c] '''+''' 2 [[PROTON]][c]
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* [[GDPKIN-RXN]]
* With common name(s):
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** 7 associated gene(s):
** 1 H2O[c] '''+''' 1 acetaldehyde[c] '''+''' 1 NADP+[c] '''=>''' 1 NADPH[c] '''+''' 1 acetate[c] '''+''' 2 H+[c]
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*** [[Ec-11_005170]]
 
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*** [[Ec-03_001380]]
== Genes associated with this reaction  ==
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*** [[Ec-22_003280]]
== Pathways  ==
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*** [[Ec-11_004330]]
* [[PWY-5768]], pyruvate fermentation to acetate VIII: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5768 PWY-5768]
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*** [[Ec-26_003930]]
** '''1''' reactions found over '''2''' reactions in the full pathway
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*** [[Ec-07_000140]]
* [[PWY-7268]], NAD/NADP-NADH/NADPH cytosolic interconversion (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7268 PWY-7268]
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*** [[Ec-04_001140]]
** '''4''' reactions found over '''5''' reactions in the full pathway
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** 2 reconstruction source(s) associated:
== Reconstruction information  ==
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*** [[annotation-esiliculosus_genome]]
* Category: [[annotation]]
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*** [[orthology-aragem]]
** Source: [[annotation-esiliculosus_genome]]
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* [[GDPPYPHOSKIN-RXN]]
*** Tool: [[pathwaytools]]
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** 1 associated gene(s):
 +
*** [[Ec-12_008850]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
* [[GTPPYPHOSKIN-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Ec-12_008850]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PPGPPSYN-RXN PPGPPSYN-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PPPGPPHYDRO-RXN PPPGPPHYDRO-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6427 RXN0-6427]
 
== External links  ==
 
== External links  ==
* RHEA:
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* ECOCYC:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25298 25298]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PPGPPMET-PWY PPGPPMET-PWY]
* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
** [http://www.genome.jp/dbget-bin/www_bget?R00711 R00711]
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{{#set: common name=ppGpp biosynthesis}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=guanosine 3'-diphosphate 5'-diphosphate biosynthesis}}
{{#set: ec number=EC-1.2.1.4}}
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{{#set: reaction found=3}}
{{#set: in pathway=PWY-5768|PWY-7268}}
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{{#set: total reaction=6}}
{{#set: reconstruction category=annotation}}
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{{#set: completion rate=50.0}}
{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:23, 21 March 2018

Pathway PPGPPMET-PWY

  • taxonomic range:
  • common name:
    • ppGpp biosynthesis
  • Synonym(s):
    • guanosine 3'-diphosphate 5'-diphosphate biosynthesis

Reaction(s) found

3 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links