Difference between revisions of "PWY-4942"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9230 RXN-9230] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-hydroxybenzoate nonaprenylt...")
(Created page with "Category:Gene == Gene Ec-03_002920 == * left end position: ** 3414274 * transcription direction: ** NEGATIVE * right end position: ** 3423257 * centisome position: ** 52.2...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9230 RXN-9230] ==
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== Gene Ec-03_002920 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3414274
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* common name:
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* transcription direction:
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** 4-hydroxybenzoate nonaprenyltransferase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.5.1.39 EC-2.5.1.39]
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** 3423257
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* centisome position:
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** 52.2967   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0238_0020
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** Esi0238_0020
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** SPL
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN-13729]]
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** 1 [[CPD-9610]][c] '''+''' 1 [[4-hydroxybenzoate]][c] '''=>''' 1 [[CPD-9864]][c] '''+''' 1 [[PPI]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 all-trans-decaprenyl diphosphate[c] '''+''' 1 4-hydroxybenzoate[c] '''=>''' 1 3-decaprenyl-4-hydroxybenzoate[c] '''+''' 1 diphosphate[c]
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* Reaction: [[RXN3DJ-11230]]
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** Source: [[orthology-aragem]]
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== Genes associated with this reaction  ==
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* Reaction: [[SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-00_007360]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-5872]], ubiquinol-10 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5872 PWY-5872]
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** '''1''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5857]], ubiquinol-10 biosynthesis (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5857 PWY-5857]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[PWY-7119]]
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* [[PWY3DJ-11470]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=3414274}}
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{{#set: common name=4-hydroxybenzoate nonaprenyltransferase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-2.5.1.39}}
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{{#set: right end position=3423257}}
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{{#set: gene associated=Ec-00_007360}}
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{{#set: centisome position=52.2967    }}
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{{#set: in pathway=PWY-5872|PWY-5857}}
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{{#set: common name=Esi_0238_0020|Esi0238_0020|SPL}}
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{{#set: reconstruction category=annotation}}
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{{#set: reaction associated=RXN-13729|RXN3DJ-11230|SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: pathway associated=PWY-7119|PWY3DJ-11470}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:24, 21 March 2018

Gene Ec-03_002920

  • left end position:
    • 3414274
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3423257
  • centisome position:
    • 52.2967
  • Synonym(s):
    • Esi_0238_0020
    • Esi0238_0020
    • SPL

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-4942&oldid=18279"