Difference between revisions of "PWY-4942"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9230 RXN-9230] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-hydroxybenzoate nonaprenylt...")
(Created page with "Category:Gene == Gene Ec-03_002920 == * left end position: ** 3414274 * transcription direction: ** NEGATIVE * right end position: ** 3423257 * centisome position: ** 52.2...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9230 RXN-9230] ==
+
== Gene Ec-03_002920 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 3414274
−
* common name:
+
* transcription direction:
−
** 4-hydroxybenzoate nonaprenyltransferase
+
** NEGATIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/2.5.1.39 EC-2.5.1.39]
+
** 3423257
 +
* centisome position:
 +
** 52.2967   
 
* Synonym(s):
 
* Synonym(s):
 +
** Esi_0238_0020
 +
** Esi0238_0020
 +
** SPL
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[RXN-13729]]
−
** 1 [[CPD-9610]][c] '''+''' 1 [[4-hydroxybenzoate]][c] '''=>''' 1 [[CPD-9864]][c] '''+''' 1 [[PPI]][c]
+
** Source: [[annotation-esiliculosus_genome]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 all-trans-decaprenyl diphosphate[c] '''+''' 1 4-hydroxybenzoate[c] '''=>''' 1 3-decaprenyl-4-hydroxybenzoate[c] '''+''' 1 diphosphate[c]
+
* Reaction: [[RXN3DJ-11230]]
−
 
+
** Source: [[orthology-aragem]]
−
== Genes associated with this reaction  ==
+
* Reaction: [[SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN]]
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-00_007360]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
== Pathways  ==
+
−
* [[PWY-5872]], ubiquinol-10 biosynthesis (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5872 PWY-5872]
+
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-5857]], ubiquinol-10 biosynthesis (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5857 PWY-5857]
+
−
** '''1''' reactions found over '''8''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
−
*** Tool: [[pathwaytools]]
+
*** Assignment: ec-number
 +
** Source: [[orthology-aragem]]
 +
== Pathways associated ==
 +
* [[PWY-7119]]
 +
* [[PWY3DJ-11470]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=3414274}}
−
{{#set: common name=4-hydroxybenzoate nonaprenyltransferase}}
+
{{#set: transcription direction=NEGATIVE}}
−
{{#set: ec number=EC-2.5.1.39}}
+
{{#set: right end position=3423257}}
−
{{#set: gene associated=Ec-00_007360}}
+
{{#set: centisome position=52.2967    }}
−
{{#set: in pathway=PWY-5872|PWY-5857}}
+
{{#set: common name=Esi_0238_0020|Esi0238_0020|SPL}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reaction associated=RXN-13729|RXN3DJ-11230|SPHINGANINE-1-PHOSPHATE-ALDOLASE-RXN}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: pathway associated=PWY-7119|PWY3DJ-11470}}
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 14:24, 21 March 2018

Gene Ec-03_002920

  • left end position:
    • 3414274
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3423257
  • centisome position:
    • 52.2967
  • Synonym(s):
    • Esi_0238_0020
    • Esi0238_0020
    • SPL

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-4942&oldid=18279"