Difference between revisions of "RXN-15268"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14273 RXN-14273] == * direction: ** LEFT-TO-RIGHT * common name: ** trans-tetradec-2-enoyl-CoA...")
(Created page with "Category:Gene == Gene Ec-12_005060 == * left end position: ** 4635702 * transcription direction: ** POSITIVE * right end position: ** 4639899 * centisome position: ** 55.6...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14273 RXN-14273] ==
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== Gene Ec-12_005060 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4635702
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* common name:
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* transcription direction:
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** trans-tetradec-2-enoyl-CoA hydratase
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** POSITIVE
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** ClpP/crotonase-like domain
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* right end position:
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** Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ
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** 4639899
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** enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase
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* centisome position:
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* ec number:
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** 55.610283   
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** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
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* Synonym(s):
 
* Synonym(s):
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** Esi_0287_0019
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** Esi0287_0019
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[5-NUCLEOTID-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[CPD-15568]][c] '''=>''' 1 [[CPD0-2171]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 H2O[c] '''+''' 1 2-trans-tetradecenoyl-CoA[c] '''=>''' 1 (S)-3-hydroxytetradecanoyl-CoA[c]
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* Reaction: [[AMP-DEPHOSPHORYLATION-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: go-term
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-14025]]
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* [[Ec-14_006530]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: go-term
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-14026]]
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* [[Ec-06_001380]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: go-term
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***EC-NUMBER
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* Reaction: [[RXN-14227]]
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* [[Ec-16_001250]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: go-term
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***EC-NUMBER
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* Reaction: [[RXN-5841]]
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* [[Ec-16_003560]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: go-term
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***EC-NUMBER
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* Reaction: [[RXN-7607]]
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== Pathways  ==
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-7654]], (8E,10E)-dodeca-8,10-dienol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7654 PWY-7654]
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*** Assignment: go-term
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** '''5''' reactions found over '''11''' reactions in the full pathway
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* Reaction: [[RXN-7609]]
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== Reconstruction information  ==
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** Source: [[annotation-esiliculosus_genome]]
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* Category: [[annotation]]
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*** Assignment: go-term
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* Reaction: [[XMPXAN-RXN]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-5381]]
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* [[PWY-6607]]
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* [[PWY-7185]]
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* [[SALVADEHYPOX-PWY]]
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* [[PWY-6596]]
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* [[NAD-BIOSYNTHESIS-II]]
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* [[PWY-6606]]
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* [[PWY-6608]]
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* [[PWY-5695]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4635702}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31173 31173]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=4639899}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04740 R04740]
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{{#set: centisome position=55.610283    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0287_0019|Esi0287_0019}}
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{{#set: common name=trans-tetradec-2-enoyl-CoA hydratase}}
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{{#set: reaction associated=5-NUCLEOTID-RXN|AMP-DEPHOSPHORYLATION-RXN|RXN-14025|RXN-14026|RXN-14227|RXN-5841|RXN-7607|RXN-7609|XMPXAN-RXN}}
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{{#set: common name=ClpP/crotonase-like domain}}
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{{#set: pathway associated=PWY-5381|PWY-6607|PWY-7185|SALVADEHYPOX-PWY|PWY-6596|NAD-BIOSYNTHESIS-II|PWY-6606|PWY-6608|PWY-5695}}
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{{#set: common name=Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ}}
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{{#set: common name=enoyl-Coenzyme A hydratase/3-hydroxyacyl Coenzyme A dehydrogenase}}
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{{#set: ec number=EC-4.2.1.17}}
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{{#set: gene associated=Ec-14_006530|Ec-06_001380|Ec-16_001250|Ec-16_003560}}
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{{#set: in pathway=PWY-7654}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:24, 21 March 2018

Gene Ec-12_005060

  • left end position:
    • 4635702
  • transcription direction:
    • POSITIVE
  • right end position:
    • 4639899
  • centisome position:
    • 55.610283
  • Synonym(s):
    • Esi_0287_0019
    • Esi0287_0019

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-15268&oldid=18303"