Difference between revisions of "PWY-7036"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9535 RXN-9535] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-[acyl-carrier-prote...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6562 PWY-6562] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-641 TAX-641...")
Line 1: Line 1:
[[Category:Reaction]]
+
[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9535 RXN-9535] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6562 PWY-6562] ==
* direction:
+
* taxonomic range:
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-641 TAX-641]
 
* common name:
 
* common name:
** 3-oxoacyl-[acyl-carrier-protein] synthase
+
** norspermidine biosynthesis
** Beta-ketoacyl synthase, N-terminal
+
** Thiolase-like, subgroup
+
** beta-ketoacyl synthase, partial
+
* ec number:
+
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
+
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
+
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
+
 
* Synonym(s):
 
* Synonym(s):
** β-ketoacyl-ACP synthase I
+
** sym-norspermidine biosynthesis
** β-ketoacyl-acyl carrier protein synthetase
+
** β-ketoacyl-[acyl carrier protein] synthase
+
** condensing enzyme
+
** β-ketoacyl acyl carrier protein synthase
+
** 3-oxoacyl-[acyl-carrier-protein] synthase
+
** acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)
+
  
== Reaction Formula ==
+
== Reaction(s) found ==
* With identifiers:
+
'''2''' reactions found over '''6''' reactions in the full pathway
** 1 [[MALONYL-ACP]][c] '''+''' 1 [[Dodecanoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-oxo-myristoyl-ACPs]][c] '''+''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* [[ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
* With common name(s):
+
** 1 associated gene(s):
** 1 a malonyl-[acp][c] '''+''' 1 a dodecanoyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 a 3-oxo-myristoyl-[acp][c] '''+''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c]
+
*** [[Ec-01_007470]]
 
+
** 2 reconstruction source(s) associated:
== Genes associated with this reaction  ==
+
*** [[annotation-esiliculosus_genome]]
Genes have been associated with this reaction based on different elements listed below.
+
*** [[orthology-aragem]]
* [[Ec-27_002090]]
+
* [[ASPARTATEKIN-RXN]]
** ESILICULOSUS_GENOME
+
** 4 associated gene(s):
***EC-NUMBER
+
*** [[Ec-24_000610]]
** [[pantograph]]-[[aragem]]
+
*** [[Ec-11_000830]]
** [[pantograph]]-[[aragem]]
+
*** [[Ec-27_003730]]
* [[Ec-12_000650]]
+
*** [[Ec-13_002530]]
** ESILICULOSUS_GENOME
+
** 2 reconstruction source(s) associated:
***GO-TERM
+
*** [[annotation-esiliculosus_genome]]
** [[pantograph]]-[[aragem]]
+
*** [[orthology-aragem]]
** [[pantograph]]-[[aragem]]
+
== Reaction(s) not found ==
* [[Ec-27_003480]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=4.1.1.86-RXN 4.1.1.86-RXN]
** ESILICULOSUS_GENOME
+
* [http://metacyc.org/META/NEW-IMAGE?object=R101-RXN R101-RXN]
***EC-NUMBER
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11565 RXN-11565]
* [[Ec-12_000640]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9380 RXN-9380]
** ESILICULOSUS_GENOME
+
***EC-NUMBER
+
== Pathways  ==
+
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
+
** '''28''' reactions found over '''31''' reactions in the full pathway
+
== Reconstruction information  ==
+
* Category: [[orthology]]
+
** Source: [[orthology-aragem]]
+
*** Tool: [[pantograph]]
+
* Category: [[annotation]]
+
** Source: [[annotation-esiliculosus_genome]]
+
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: taxonomic range=TAX-641}}
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
+
{{#set: common name=norspermidine biosynthesis}}
{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
+
{{#set: common name=sym-norspermidine biosynthesis}}
{{#set: common name=Thiolase-like, subgroup}}
+
{{#set: reaction found=2}}
{{#set: common name=beta-ketoacyl synthase, partial}}
+
{{#set: total reaction=6}}
{{#set: ec number=EC-2.3.1.86}}
+
{{#set: completion rate=33.0}}
{{#set: ec number=EC-2.3.1.85}}
+
{{#set: ec number=EC-2.3.1.41}}
+
{{#set: common name=β-ketoacyl-ACP synthase I|β-ketoacyl-acyl carrier protein synthetase|β-ketoacyl-[acyl carrier protein] synthase|condensing enzyme|β-ketoacyl acyl carrier protein synthase|3-oxoacyl-[acyl-carrier-protein] synthase|acyl-[acyl-carrier-protein]:malonyl-[acyl-carrier-protein] C-acyltransferase (decarboxylating)}}
+
{{#set: gene associated=Ec-27_002090|Ec-12_000650|Ec-27_003480|Ec-12_000640}}
+
{{#set: in pathway=PWY-5971}}
+
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 13:24, 21 March 2018

Pathway PWY-6562

  • taxonomic range:
  • common name:
    • norspermidine biosynthesis
  • Synonym(s):
    • sym-norspermidine biosynthesis

Reaction(s) found

2 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links