Difference between revisions of "CPD-13534"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2PTERIDINEPYROPHOSPHOKIN-RXN H2PTERIDINEPYROPHOSPHOKIN-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Lysidine-tRNA-Ile2 Lysidine-tRNA-Ile2] == * common name: ** a lysidine34 in tRNAIle2 * Synonym(...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=H2PTERIDINEPYROPHOSPHOKIN-RXN H2PTERIDINEPYROPHOSPHOKIN-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Lysidine-tRNA-Ile2 Lysidine-tRNA-Ile2] ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
 
* common name:
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** 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase
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** a lysidine34 in tRNAIle2
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.6.3 EC-2.7.6.3]
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* Synonym(s):
 
* Synonym(s):
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** a [tRNAIle2]-N6-(4-amino-1-β-D-ribofuranosylpyrimidin-2-ylidene)-L-lysine34
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** a [tRNAIle2]-lysidine34
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[ATP]][c] '''+''' 1 [[AMINO-OH-HYDROXYMETHYL-DIHYDROPTERIDINE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[DIHYDROPTERIN-CH2OH-PP]][c] '''+''' 1 [[PROTON]][c]
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* [[RXN-1961]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 ATP[c] '''+''' 1 6-(hydroxymethyl)-7,8-dihydropterin[c] '''=>''' 1 AMP[c] '''+''' 1 (7,8-dihydropterin-6-yl)methyl diphosphate[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-12_000230]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY-7539]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7539 PWY-7539]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6797]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6797 PWY-6797]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6147 PWY-6147]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: common name=a lysidine34 in tRNAIle2}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11412 11412]
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{{#set: common name=a [tRNAIle2]-N6-(4-amino-1-β-D-ribofuranosylpyrimidin-2-ylidene)-L-lysine34|a [tRNAIle2]-lysidine34}}
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* LIGAND-RXN:
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{{#set: produced by=RXN-1961}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03503 R03503]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P22291 P22291]
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** [http://www.uniprot.org/uniprot/P26281 P26281]
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** [http://www.uniprot.org/uniprot/O84619 O84619]
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** [http://www.uniprot.org/uniprot/Q9ZM35 Q9ZM35]
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** [http://www.uniprot.org/uniprot/Q9RXY4 Q9RXY4]
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** [http://www.uniprot.org/uniprot/O66550 O66550]
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** [http://www.uniprot.org/uniprot/O25680 O25680]
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** [http://www.uniprot.org/uniprot/Q9PJ54 Q9PJ54]
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** [http://www.uniprot.org/uniprot/Q9JV81 Q9JV81]
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** [http://www.uniprot.org/uniprot/P64143 P64143]
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** [http://www.uniprot.org/uniprot/Q9Z7E8 Q9Z7E8]
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** [http://www.uniprot.org/uniprot/P82602 P82602]
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** [http://www.uniprot.org/uniprot/P29252 P29252]
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** [http://www.uniprot.org/uniprot/P72736 P72736]
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** [http://www.uniprot.org/uniprot/O04862 O04862]
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** [http://www.uniprot.org/uniprot/Q9SZV3 Q9SZV3]
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** [http://www.uniprot.org/uniprot/Q9X8I1 Q9X8I1]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase}}
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{{#set: ec number=EC-2.7.6.3}}
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{{#set: gene associated=Ec-12_000230}}
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{{#set: in pathway=PWY-7539|PWY-6797|PWY-6147}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 14:26, 21 March 2018

Metabolite Lysidine-tRNA-Ile2

  • common name:
    • a lysidine34 in tRNAIle2
  • Synonym(s):
    • a [tRNAIle2]-N6-(4-amino-1-β-D-ribofuranosylpyrimidin-2-ylidene)-L-lysine34
    • a [tRNAIle2]-lysidine34

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • "a [tRNAIle2]-N6-(4-amino-1-β-D-ribofuranosylpyrimidin-2-ylidene)-L-lysine34" cannot be used as a page name in this wiki.
  • "a [tRNAIle2]-lysidine34" cannot be used as a page name in this wiki.
Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-13534&oldid=18634"