Difference between revisions of "CPD-14772"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9531 RXN-9531] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-dodecanoyl-[acyl-carrie...")
(Created page with "Category:Gene == Gene Ec-07_002120 == * left end position: ** 2300109 * transcription direction: ** POSITIVE * right end position: ** 2312173 * centisome position: ** 29.7...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9531 RXN-9531] ==
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== Gene Ec-07_002120 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2300109
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* common name:
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* transcription direction:
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** 3-oxo-dodecanoyl-[acyl-carrier protein] synthase
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** POSITIVE
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** Beta-ketoacyl synthase, N-terminal
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* right end position:
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** Thiolase-like, subgroup
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** 2312173
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** beta-ketoacyl synthase, partial
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* centisome position:
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** 3-oxoacyl-[acyl-carrier-protein] synthase
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** 29.784784   
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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* Synonym(s):
 
* Synonym(s):
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** Esi_0061_0065
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** Esi0061_0065
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATP-ADENYLYLTRANSFERASE-RXN]]
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** 1 [[MALONYL-ACP]][c] '''+''' 1 [[Decanoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[3-oxo-dodecanoyl-ACPs]][c]
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* With common name(s):
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** 1 a malonyl-[acp][c] '''+''' 1 a decanoyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 CO2[c] '''+''' 1 a 3-oxo-dodecanoyl-[acp][c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-27_002090]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-27_003480]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-12_000650]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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** [[pantograph]]-[[aragem]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-12_000640]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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** '''28''' reactions found over '''31''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=2300109}}
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{{#set: common name=3-oxo-dodecanoyl-[acyl-carrier protein] synthase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
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{{#set: right end position=2312173}}
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{{#set: common name=Thiolase-like, subgroup}}
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{{#set: centisome position=29.784784    }}
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{{#set: common name=beta-ketoacyl synthase, partial}}
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{{#set: common name=Esi_0061_0065|Esi0061_0065}}
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{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
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{{#set: reaction associated=ATP-ADENYLYLTRANSFERASE-RXN}}
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{{#set: ec number=EC-2.3.1.41}}
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{{#set: gene associated=Ec-27_002090|Ec-27_003480|Ec-12_000650|Ec-12_000640}}
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{{#set: in pathway=PWY-5971}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 13:27, 21 March 2018

Gene Ec-07_002120

  • left end position:
    • 2300109
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2312173
  • centisome position:
    • 29.784784
  • Synonym(s):
    • Esi_0061_0065
    • Esi0061_0065

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-14772&oldid=18715"