Difference between revisions of "Ec-07 002120"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3052 TAX-3052...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.149-RXN 2.4.1.149-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.149-RXN 2.4.1.149-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3052 TAX-3052]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://enzyme.expasy.org/EC/2.4.1.149 EC-2.4.1.149]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-68336 TAX-68336]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-200783 TAX-200783]
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* common name:
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** reductive TCA cycle I
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* Synonym(s):
 
* Synonym(s):
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** reductive tricarboxylic acid cycle
 
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** reductive tricarboxylic acid pathway
 
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** reductive citric acid cycle
 
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** reverse citric acid cycle
 
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** carbon fixation
 
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** CO2 fixation
 
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** reductive carboxylic acid cycle
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''10''' reactions found over '''12''' reactions in the full pathway
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* With identifiers:
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* [[ACONITATEDEHYDR-RXN]]
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** 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''+''' 1 [[B-Gal-14-NacGlc-R]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[N-ACETYL-BETA-D-GLUCOSAMINYL-13-ETCETERA]][c] '''+''' 1 [[UDP]][c]
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** 2 associated gene(s):
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* With common name(s):
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*** [[Ec-16_001000]]
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** 1 UDP-N-acetyl-α-D-glucosamine[c] '''+''' 1 β-D-galactosyl-(1→4)-N-acetyl-β-D-glucosaminyl-R[c] '''=>''' 1 H+[c] '''+''' 1 N-acetyl-β-D-glucosaminyl-1,3-β-D-galactosyl-1,4-N-acetyl-β-D-glucosaminyl-R[c] '''+''' 1 UDP[c]
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*** [[Ec-12_000170]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-esiliculosus_genome]]
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== Pathways  ==
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* [[ACONITATEHYDR-RXN]]
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* [[PWY-7434]], terminal O-glycans residues modification: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7434 PWY-7434]
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** 2 associated gene(s):
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** '''10''' reactions found over '''10''' reactions in the full pathway
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*** [[Ec-12_000170]]
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== Reconstruction information  ==
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*** [[Ec-16_001000]]
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* Category: [[annotation]]
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** 1 reconstruction source(s) associated:
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** Source: [[annotation-esiliculosus_genome]]
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*** [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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* [[ATP-CITRATE-PRO-S--LYASE-RXN]]
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** 1 associated gene(s):
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*** [[Ec-06_008380]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aragem]]
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* [[FUMHYDR-RXN]]
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** 2 associated gene(s):
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*** [[Ec-23_003460]]
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*** [[Ec-25_001360]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[ISOCITDEH-RXN]]
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** 1 associated gene(s):
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*** [[Ec-11_003080]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[MALATE-DEH-RXN]]
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** 2 associated gene(s):
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*** [[Ec-10_006200]]
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*** [[Ec-02_003100]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[PEPCARBOX-RXN]]
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** 1 associated gene(s):
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*** [[Ec-28_003470]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[PEPSYNTH-RXN]]
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** 0 associated gene:
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[PYRUFLAVREDUCT-RXN]]
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** 3 associated gene(s):
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*** [[Ec-23_002710]]
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*** [[Ec-15_004230]]
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*** [[Ec-18_003420]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[SUCCCOASYN-RXN]]
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** 2 associated gene(s):
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*** [[Ec-10_000030]]
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*** [[Ec-02_001020]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-3052}}
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* RHEA:
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{{#set: taxonomic range=TAX-1224}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14389 14389]
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{{#set: taxonomic range=TAX-2157}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-68336}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02789 R02789]
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{{#set: taxonomic range=TAX-200783}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=reductive TCA cycle I}}
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{{#set: ec number=EC-2.4.1.149}}
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{{#set: common name=reductive tricarboxylic acid cycle|reductive tricarboxylic acid pathway|reductive citric acid cycle|reverse citric acid cycle|carbon fixation|CO2 fixation|reductive carboxylic acid cycle}}
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{{#set: in pathway=PWY-7434}}
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{{#set: reaction found=10}}
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{{#set: reconstruction category=annotation}}
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{{#set: total reaction=12}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: completion rate=83.0}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:27, 21 March 2018

Reaction 2.4.1.149-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-7434, terminal O-glycans residues modification: PWY-7434
    • 10 reactions found over 10 reactions in the full pathway

Reconstruction information

External links




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