Difference between revisions of "PWY-7654"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=FASYN-INITIAL-PWY FASYN-INITIAL-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?obje...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALLANTOINASE-RXN ALLANTOINASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme....")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=FASYN-INITIAL-PWY FASYN-INITIAL-PWY] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALLANTOINASE-RXN ALLANTOINASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33084 TAX-33084]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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* ec number:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://enzyme.expasy.org/EC/3.5.2.5 EC-3.5.2.5]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
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** superpathway of fatty acid biosynthesis initiation (E. coli)
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''5''' reactions found over '''8''' reactions in the full pathway
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* With identifiers:
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* [[3-OXOACYL-ACP-SYNTH-BASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[S-ALLANTOIN]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ALLANTOATE]][c]
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** 4 associated gene(s):
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* With common name(s):
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*** [[Ec-12_000650]]
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** 1 H2O[c] '''+''' 1 (S)-(+)-allantoin[c] '''=>''' 1 H+[c] '''+''' 1 allantoate[c]
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*** [[Ec-27_003480]]
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*** [[Ec-27_002090]]
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== Genes associated with this reaction  ==
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*** [[Ec-12_000640]]
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== Pathways  ==
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** 2 reconstruction source(s) associated:
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* [[PWY-5697]], allantoin degradation to ureidoglycolate I (urea producing): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5697 PWY-5697]
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*** [[annotation-esiliculosus_genome]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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*** [[orthology-aragem]]
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* [[PWY-5698]], allantoin degradation to ureidoglycolate II (ammonia producing): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5698 PWY-5698]
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* [[ACP-S-ACETYLTRANSFER-RXN]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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** 2 associated gene(s):
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== Reconstruction information  ==
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*** [[Ec-12_000650]]
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* Category: [[annotation]]
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*** [[Ec-27_002090]]
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** Source: [[annotation-esiliculosus_genome]]
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** 1 reconstruction source(s) associated:
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*** Tool: [[pathwaytools]]
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*** [[orthology-aragem]]
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* [[PWY-4381]]
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** 0 associated gene:
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* [[PWY-5965]]
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** 0 associated gene:
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* [[PWY-5966]]
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** 0 associated gene:
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== Reaction(s) not found ==
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== External links  ==
 
== External links  ==
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* ECOCYC:
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* LIGAND-RXN:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=FASYN-INITIAL-PWY FASYN-INITIAL-PWY]
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** [http://www.genome.jp/dbget-bin/www_bget?R02425 R02425]
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{{#set: taxonomic range=TAX-33084}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-33208}}
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** [http://www.uniprot.org/uniprot/P77671 P77671]
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.uniprot.org/uniprot/P32375 P32375]
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{{#set: taxonomic range=TAX-2}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=superpathway of fatty acid biosynthesis initiation (E. coli)}}
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{{#set: ec number=EC-3.5.2.5}}
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{{#set: reaction found=5}}
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{{#set: in pathway=PWY-5697|PWY-5698}}
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{{#set: total reaction=8}}
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{{#set: reconstruction category=annotation}}
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{{#set: completion rate=63.0}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:30, 21 March 2018

Reaction ALLANTOINASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 (S)-(+)-allantoin[c] => 1 H+[c] + 1 allantoate[c]

Genes associated with this reaction

Pathways

  • PWY-5697, allantoin degradation to ureidoglycolate I (urea producing): PWY-5697
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5698, allantoin degradation to ureidoglycolate II (ammonia producing): PWY-5698
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-7654&oldid=19148"