Difference between revisions of "Trans-D3-cis-D5-dodecenoyl-ACPs"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENODEAMIN-RXN ADENODEAMIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Adenosine/AMP d...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PROUT-PWY PROUT-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENODEAMIN-RXN ADENODEAMIN-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PROUT-PWY PROUT-PWY] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** Adenosine/AMP deaminase domain
+
** L-proline degradation
−
** adenosine deaminase
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/3.5.4.4 EC-3.5.4.4]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** L-proline utilization
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''3''' reactions found over '''3''' reactions in the full pathway
−
** 1 [[ADENOSINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[INOSINE]][c]
+
* [[RXN-14116]]
−
* With common name(s):
+
** 0 associated gene:
−
** 1 adenosine[c] '''+''' 1 H+[c] '''+''' 1 H2O[c] '''=>''' 1 ammonium[c] '''+''' 1 inosine[c]
+
** 1 reconstruction source(s) associated:
−
 
+
*** [[annotation-esiliculosus_genome]]
−
== Genes associated with this reaction  ==
+
* [[RXN-14903]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** 1 associated gene(s):
−
* [[Ec-04_003130]]
+
*** [[Ec-18_001350]]
−
** ESILICULOSUS_GENOME
+
** 1 reconstruction source(s) associated:
−
***GO-TERM
+
*** [[annotation-esiliculosus_genome]]
−
* [[Ec-00_010560]]
+
* [[SPONTPRO-RXN]]
−
** ESILICULOSUS_GENOME
+
** 0 associated gene:
−
***AUTOMATED-NAME-MATCH
+
** 1 reconstruction source(s) associated:
−
** [[pantograph]]-[[aragem]]
+
*** [[annotation-esiliculosus_genome]]
−
== Pathways  ==
+
== Reaction(s) not found ==
−
* [[PWY0-1296]], purine ribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1296 PWY0-1296]
+
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-6609]], adenine and adenosine salvage III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6609 PWY-6609]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-6611]], adenine and adenosine salvage V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6611 PWY-6611]
+
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
−
* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=SALVADEHYPOX-PWY SALVADEHYPOX-PWY]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
−
** Source: [[orthology-aragem]]
+
−
*** Tool: [[pantograph]]
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: taxonomic range=TAX-2759}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24408 24408]
+
{{#set: taxonomic range=TAX-2157}}
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-2}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01560 R01560]
+
{{#set: common name=L-proline degradation}}
−
* UNIPROT:
+
{{#set: common name=L-proline utilization}}
−
** [http://www.uniprot.org/uniprot/P22333 P22333]
+
{{#set: reaction found=3}}
−
** [http://www.uniprot.org/uniprot/P00813 P00813]
+
{{#set: total reaction=3}}
−
** [http://www.uniprot.org/uniprot/P03958 P03958]
+
{{#set: completion rate=100.0}}
−
** [http://www.uniprot.org/uniprot/Q9CIR9 Q9CIR9]
+
−
** [http://www.uniprot.org/uniprot/P55266 P55266]
+
−
** [http://www.uniprot.org/uniprot/P53984 P53984]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=Adenosine/AMP deaminase domain}}
+
−
{{#set: common name=adenosine deaminase}}
+
−
{{#set: ec number=EC-3.5.4.4}}
+
−
{{#set: gene associated=Ec-04_003130|Ec-00_010560}}
+
−
{{#set: in pathway=PWY0-1296|PWY-6609|PWY-6611|SALVADEHYPOX-PWY}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 13:31, 21 March 2018

Pathway PROUT-PWY

  • taxonomic range:
  • common name:
    • L-proline degradation
  • Synonym(s):
    • L-proline utilization

Reaction(s) found

3 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Trans-D3-cis-D5-dodecenoyl-ACPs&oldid=19269"