Difference between revisions of "PWY-6973"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33084 TAX-330...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
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[[Category:Pathway]]
 
[[Category:Pathway]]
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY] ==
 
* taxonomic range:
 
* taxonomic range:
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33084 TAX-33084]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
+
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
** fatty acid β-oxidation I
+
** reductive acetyl coenzyme A pathway I (homoacetogenic bacteria)
 
* Synonym(s):
 
* Synonym(s):
 +
** Wood pathway
 +
** acetate synthesis
 +
** acetyl-CoA pathway
 +
** carbon monoxide dehydrogenase pathway
 +
** carbon fixation
 +
** CO2 fixation
 +
** Ljungdahl-Wood pathway
 +
** Wood-Ljungdahl pathway
 +
** reductive acetyl CoA pathway
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
  '''5''' reactions found over '''7''' reactions in the full pathway
+
  '''5''' reactions found over '''9''' reactions in the full pathway
* [[ACYLCOADEHYDROG-RXN]]
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* [[1.5.1.20-RXN]]
** 6 associated gene(s):
+
** 2 associated gene(s):
*** [[Ec-16_004260]]
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*** [[Ec-03_002180]]
*** [[Ec-14_001600]]
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*** [[Ec-08_003880]]
*** [[Ec-03_003490]]
+
*** [[Ec-21_001100]]
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*** [[Ec-06_008910]]
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*** [[Ec-08_006390]]
+
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
* [[ACYLCOASYN-RXN]]
+
* [[FORMATETHFLIG-RXN]]
** 4 associated gene(s):
+
** 2 associated gene(s):
*** [[Ec-12_008720]]
+
*** [[Ec-25_001900]]
*** [[Ec-01_001560]]
+
*** [[Ec-01_009540]]
*** [[Ec-02_006430]]
+
*** [[Ec-03_003710]]
+
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
* [[ENOYL-COA-DELTA-ISOM-RXN]]
+
* [[METHENYLTHFCYCLOHYDRO-RXN]]
** 1 associated gene(s):
+
** 2 associated gene(s):
*** [[Ec-20_003150]]
+
*** [[Ec-14_004070]]
 +
*** [[Ec-15_001370]]
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
* [[ENOYL-COA-HYDRAT-RXN]]
+
* [[METHYLENETHFDEHYDROG-NADP-RXN]]
** 4 associated gene(s):
+
** 3 associated gene(s):
*** [[Ec-16_001250]]
+
*** [[Ec-15_001370]]
*** [[Ec-06_001380]]
+
*** [[Ec-14_004070]]
*** [[Ec-16_003560]]
+
*** [[Ec-07_007470]]
*** [[Ec-14_006530]]
+
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
* [[OHACYL-COA-DEHYDROG-RXN]]
+
* [[RXN-5061]]
** 2 associated gene(s):
+
** 0 associated gene:
*** [[Ec-19_005290]]
+
*** [[Ec-14_006530]]
+
 
** 1 reconstruction source(s) associated:
 
** 1 reconstruction source(s) associated:
 
*** [[annotation-esiliculosus_genome]]
 
*** [[annotation-esiliculosus_genome]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
* [http://metacyc.org/META/NEW-IMAGE?object=KETOACYLCOATHIOL-RXN KETOACYLCOATHIOL-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=1.2.7.4-RXN 1.2.7.4-RXN]
* [http://metacyc.org/META/NEW-IMAGE?object=OHBUTYRYL-COA-EPIM-RXN OHBUTYRYL-COA-EPIM-RXN]
+
* [http://metacyc.org/META/NEW-IMAGE?object=ACETYLSYNCLTH-RXN ACETYLSYNCLTH-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=FORMATE-DEHYDROGENASE-NADP+-RXN FORMATE-DEHYDROGENASE-NADP+-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=METHCOCLTH-RXN METHCOCLTH-RXN]
 
== External links  ==
 
== External links  ==
* ECOCYC:
+
{{#set: taxonomic range=TAX-2157}}
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=FAO-PWY FAO-PWY]
+
{{#set: taxonomic range=TAX-33084}}
+
{{#set: taxonomic range=TAX-33208}}
+
 
{{#set: taxonomic range=TAX-2}}
 
{{#set: taxonomic range=TAX-2}}
{{#set: common name=fatty acid β-oxidation I}}
+
{{#set: common name=reductive acetyl coenzyme A pathway I (homoacetogenic bacteria)}}
 +
{{#set: common name=Wood pathway|acetate synthesis|acetyl-CoA pathway|carbon monoxide dehydrogenase pathway|carbon fixation|CO2 fixation|Ljungdahl-Wood pathway|Wood-Ljungdahl pathway|reductive acetyl CoA pathway}}
 
{{#set: reaction found=5}}
 
{{#set: reaction found=5}}
{{#set: total reaction=7}}
+
{{#set: total reaction=9}}
{{#set: completion rate=71.0}}
+
{{#set: completion rate=56.0}}

Revision as of 13:33, 21 March 2018

Pathway CODH-PWY

  • taxonomic range:
  • common name:
    • reductive acetyl coenzyme A pathway I (homoacetogenic bacteria)
  • Synonym(s):
    • Wood pathway
    • acetate synthesis
    • acetyl-CoA pathway
    • carbon monoxide dehydrogenase pathway
    • carbon fixation
    • CO2 fixation
    • Ljungdahl-Wood pathway
    • Wood-Ljungdahl pathway
    • reductive acetyl CoA pathway

Reaction(s) found

5 reactions found over 9 reactions in the full pathway

Reaction(s) not found

External links