Difference between revisions of "Ec-27 004830"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FERREDOXIN--NITRITE-REDUCTASE-RXN FERREDOXIN--NITRITE-REDUCTASE-RXN] == * direction: ** LEFT-TO-RIG...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FERREDOXIN--NITRITE-REDUCTASE-RXN FERREDOXIN--NITRITE-REDUCTASE-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/1.7.7.1 EC-1.7.7.1]
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** 1,3-propanediol biosynthesis (engineered)
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* Synonym(s):
 
* Synonym(s):
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** 1,3-PDO biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''5''' reactions found over '''9''' reactions in the full pathway
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* With identifiers:
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* [[1.1.1.8-RXN]]
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** 8 [[PROTON]][c] '''+''' 1 [[NITRITE]][c] '''+''' 6 [[Reduced-ferredoxins]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 6 [[Oxidized-ferredoxins]][c]
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** 3 associated gene(s):
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* With common name(s):
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*** [[Ec-27_006990]]
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** 8 H+[c] '''+''' 1 nitrite[c] '''+''' 6 a reduced ferredoxin [iron-sulfur] cluster[c] '''=>''' 2 H2O[c] '''+''' 1 ammonium[c] '''+''' 6 an oxidized ferredoxin [iron-sulfur] cluster[c]
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*** [[Ec-19_001930]]
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*** [[Ec-19_004200]]
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== Genes associated with this reaction  ==
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** 1 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-esiliculosus_genome]]
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* Gene: [[Ec-01_002720]]
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* [[6PFRUCTPHOS-RXN]]
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** Source: [[orthology-aragem]]
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** 3 associated gene(s):
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** Source: [[orthology-aragem]]
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*** [[Ec-12_002540]]
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== Pathways  ==
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*** [[Ec-22_000070]]
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* [[PWY-381]], nitrate reduction II (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY-381 PWY-381]
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*** [[Ec-14_003880]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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** 2 reconstruction source(s) associated:
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* [[PWY490-3]], nitrate reduction VI (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-3 PWY490-3]
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*** [[annotation-esiliculosus_genome]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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*** [[orthology-aragem]]
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== Reconstruction information  ==
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* [[F16ALDOLASE-RXN]]
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* Category: [[orthology]]
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** 4 associated gene(s):
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** Source: [[orthology-aragem]]
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*** [[Ec-10_000880]]
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*** Tool: [[pantograph]]
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*** [[Ec-10_004980]]
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*** [[Ec-14_001680]]
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*** [[Ec-01_008040]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[GLUCOKIN-RXN]]
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** 1 associated gene(s):
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*** [[Ec-27_005030]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[PGLUCISOM-RXN]]
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** 3 associated gene(s):
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*** [[Ec-24_002470]]
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*** [[Ec-13_003530]]
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*** [[Ec-13_003810]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=GLYCEROL-DEHYDRATASE-RXN GLYCEROL-DEHYDRATASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14965 RXN-14965]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-6487 RXN0-6487]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN0-7077 RXN0-7077]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-4751}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00790 R00790]
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{{#set: common name=1,3-propanediol biosynthesis (engineered)}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=1,3-PDO biosynthesis}}
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{{#set: ec number=EC-1.7.7.1}}
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{{#set: reaction found=5}}
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{{#set: gene associated=Ec-01_002720}}
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{{#set: total reaction=9}}
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{{#set: in pathway=PWY-381|PWY490-3}}
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{{#set: completion rate=56.0}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-aragem}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 13:33, 21 March 2018

Reaction FERREDOXIN--NITRITE-REDUCTASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-381, nitrate reduction II (assimilatory): PWY-381
    • 3 reactions found over 3 reactions in the full pathway
  • PWY490-3, nitrate reduction VI (assimilatory): PWY490-3
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-27_004830&oldid=19652"