Difference between revisions of "Ec-04 002070"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6890 PWY-6890] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7740 RXN-7740] == * direction: ** LEFT-TO-RIGHT * common name: ** Pheophorbide a oxygenase * ec...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6890 PWY-6890] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7740 RXN-7740] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33630 TAX-33630]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* common name:
 
* common name:
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** 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis
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** Pheophorbide a oxygenase
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* ec number:
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** [http://enzyme.expasy.org/EC/1.14.15.17 EC-1.14.15.17]
 
* Synonym(s):
 
* Synonym(s):
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** HMP-PP biosynthesis
 
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''1''' reactions found over '''2''' reactions in the full pathway
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* With identifiers:
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* [[PYRIMSYN3-RXN]]
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** 2 [[PROTON]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-7061]][c] '''=>''' 1 [[CPD-7063]][c] '''+''' 2 [[Oxidized-ferredoxins]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Ec-06_006870]]
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** 2 H+[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 oxygen[c] '''+''' 1 pheophorbide a[c] '''=>''' 1 red chlorophyll catabolite[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c]
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** 1 reconstruction source(s) associated:
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*** [[orthology-aragem]]
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== Genes associated with this reaction  ==
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== Reaction(s) not found ==
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Genes have been associated with this reaction based on different elements listed below.
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* [http://metacyc.org/META/NEW-IMAGE?object=PYRIMSYN1-RXN PYRIMSYN1-RXN]
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* Gene: [[Ec-03_003240]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[Ec-14_003590]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* ECOCYC:
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* RHEA:
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6890 PWY-6890]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24759 24759]
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{{#set: taxonomic range=TAX-4751}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.genome.jp/dbget-bin/www_bget?R08921 R08921]
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{{#set: taxonomic range=TAX-33630}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: common name=Pheophorbide a oxygenase}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: ec number=EC-1.14.15.17}}
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{{#set: common name=4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis}}
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{{#set: gene associated=Ec-03_003240|Ec-14_003590}}
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{{#set: common name=HMP-PP biosynthesis}}
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{{#set: in pathway=}}
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{{#set: reaction found=1}}
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{{#set: reconstruction category=annotation}}
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{{#set: total reaction=2}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: completion rate=50.0}}
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{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:34, 21 March 2018

Reaction RXN-7740

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Pheophorbide a oxygenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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