Difference between revisions of "RXN-17678"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6383 PWY-6383] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1762 TAX-17...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PGLUCONOLACT-RXN 6PGLUCONOLACT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 6-Phosphogl...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6383 PWY-6383] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PGLUCONOLACT-RXN 6PGLUCONOLACT-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1762 TAX-1762]
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** mono-trans, poly-cis decaprenyl phosphate biosynthesis
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** 6-Phosphogluconolactonase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.1.31 EC-3.1.1.31]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''5''' reactions in the full pathway
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* With identifiers:
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* [[GPPSYN-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[D-6-P-GLUCONO-DELTA-LACTONE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-2961]][c]
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** 12 associated gene(s):
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* With common name(s):
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*** [[Ec-07_006170]]
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** 1 H2O[c] '''+''' 1 6-phospho D-glucono-1,5-lactone[c] '''=>''' 1 H+[c] '''+''' 1 D-gluconate 6-phosphate[c]
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*** [[Ec-16_004330]]
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*** [[Ec-08_002270]]
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== Genes associated with this reaction  ==
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*** [[Ec-10_003020]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Ec-00_007350]]
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* Gene: [[Ec-02_004960]]
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*** [[Ec-14_006550]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-24_003910]]
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*** Assignment: EC-NUMBER
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*** [[Ec-26_003280]]
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** Source: [[orthology-aragem]]
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*** [[Ec-21_000990]]
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** Source: [[orthology-aragem]]
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*** [[Ec-25_002110]]
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== Pathways  ==
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*** [[Ec-17_001240]]
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* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
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*** [[Ec-18_000990]]
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** '''13''' reactions found over '''18''' reactions in the full pathway
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** 2 reconstruction source(s) associated:
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* [[RUMP-PWY]], formaldehyde oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=RUMP-PWY RUMP-PWY]
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*** [[annotation-esiliculosus_genome]]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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*** [[orthology-aragem]]
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* [[OXIDATIVEPENT-PWY]], pentose phosphate pathway (oxidative branch): [http://metacyc.org/META/NEW-IMAGE?object=OXIDATIVEPENT-PWY OXIDATIVEPENT-PWY]
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* [[IPPISOM-RXN]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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** 2 associated gene(s):
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* [[GLYCOLYSIS-E-D]], superpathway of glycolysis and Entner-Doudoroff: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS-E-D GLYCOLYSIS-E-D]
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*** [[Ec-11_001030]]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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*** [[Ec-18_002690]]
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== Reconstruction information  ==
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** 2 reconstruction source(s) associated:
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* Category: [[orthology]]
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*** [[annotation-esiliculosus_genome]]
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** Source: [[orthology-aragem]]
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*** [[orthology-aragem]]
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*** Tool: [[pantograph]]
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== Reaction(s) not found ==
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* Category: [[annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=2.5.1.68-RXN 2.5.1.68-RXN]
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** Source: [[annotation-esiliculosus_genome]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11023 RXN-11023]
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*** Tool: [[pathwaytools]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-11027 RXN-11027]
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== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-1762}}
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* RHEA:
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{{#set: common name=mono-trans, poly-cis decaprenyl phosphate biosynthesis}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12556 12556]
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{{#set: reaction found=2}}
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* LIGAND-RXN:
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{{#set: total reaction=5}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02035 R02035]
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{{#set: completion rate=40.0}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P63337 P63337]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=6-Phosphogluconolactonase}}
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{{#set: ec number=EC-3.1.1.31}}
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{{#set: gene associated=Ec-02_004960}}
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{{#set: in pathway=P122-PWY|RUMP-PWY|OXIDATIVEPENT-PWY|GLYCOLYSIS-E-D}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 13:35, 21 March 2018

Reaction 6PGLUCONOLACT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 6-Phosphogluconolactonase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • P122-PWY, heterolactic fermentation: P122-PWY
    • 13 reactions found over 18 reactions in the full pathway
  • RUMP-PWY, formaldehyde oxidation I: RUMP-PWY
    • 4 reactions found over 6 reactions in the full pathway
  • OXIDATIVEPENT-PWY, pentose phosphate pathway (oxidative branch): OXIDATIVEPENT-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • GLYCOLYSIS-E-D, superpathway of glycolysis and Entner-Doudoroff: GLYCOLYSIS-E-D
    • 4 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





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