Difference between revisions of "Ec-12 005460"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-SELENOCYSTEINE L-SELENOCYSTEINE] == * smiles: ** C([Se])C([N+])C([O-])=O * inchi key: ** InCh...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.8.15-RXN 2.7.8.15-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Glycosyl transferase,...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=L-SELENOCYSTEINE L-SELENOCYSTEINE] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.8.15-RXN 2.7.8.15-RXN] ==
−
* smiles:
+
* direction:
−
** C([Se])C([N+])C([O-])=O
+
** LEFT-TO-RIGHT
−
* inchi key:
+
−
** InChIKey=ZKZBPNGNEQAJSX-REOHCLBHSA-N
+
 
* common name:
 
* common name:
−
** L-selenocysteine
+
** Glycosyl transferase, family 4
−
* molecular weight:
+
* ec number:
−
** 168.054   
+
** [http://enzyme.expasy.org/EC/2.7.8.15 EC-2.7.8.15]
 
* Synonym(s):
 
* Synonym(s):
−
** U
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
* [[RXN-12726]]
+
** 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''+''' 1 [[DOLICHOLP]][c] '''=>''' 1 [[CPD-190]][c] '''+''' 1 [[UMP]][c]
−
== Reaction(s) of unknown directionality ==
+
* With common name(s):
 +
** 1 UDP-N-acetyl-α-D-glucosamine[c] '''+''' 1 a dolichyl phosphate[c] '''=>''' 1 an N-acetyl-α-D-glucosaminyl-diphosphodolichol[c] '''+''' 1 UMP[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-07_007020]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-aragem]]
 +
== Pathways  ==
 +
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
 +
** '''19''' reactions found over '''19''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-CPD:
+
* RHEA:
−
** [http://www.genome.jp/dbget-bin/www_bget?C05688 C05688]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13289 13289]
−
* CHEBI:
+
* LIGAND-RXN:
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57843 57843]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01007 R01007]
−
* METABOLIGHTS : MTBLC57843
+
* UNIPROT:
−
* PUBCHEM:
+
** [http://www.uniprot.org/uniprot/P07286 P07286]
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25245418 25245418]
+
** [http://www.uniprot.org/uniprot/P23338 P23338]
−
* HMDB : HMDB03288
+
** [http://www.uniprot.org/uniprot/P42864 P42864]
−
{{#set: smiles=C([Se])C([N+])C([O-])=O}}
+
** [http://www.uniprot.org/uniprot/P39465 P39465]
−
{{#set: inchi key=InChIKey=ZKZBPNGNEQAJSX-REOHCLBHSA-N}}
+
** [http://www.uniprot.org/uniprot/Q9UY90 Q9UY90]
−
{{#set: common name=L-selenocysteine}}
+
** [http://www.uniprot.org/uniprot/Q58513 Q58513]
−
{{#set: molecular weight=168.054    }}
+
** [http://www.uniprot.org/uniprot/P42867 P42867]
−
{{#set: common name=U}}
+
** [http://www.uniprot.org/uniprot/P42881 P42881]
−
{{#set: produced by=RXN-12726}}
+
** [http://www.uniprot.org/uniprot/P96000 P96000]
 +
** [http://www.uniprot.org/uniprot/Q9M2M5 Q9M2M5]
 +
** [http://www.uniprot.org/uniprot/O22211 O22211]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Glycosyl transferase, family 4}}
 +
{{#set: ec number=EC-2.7.8.15}}
 +
{{#set: gene associated=Ec-07_007020}}
 +
{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 13:35, 21 March 2018

Reaction 2.7.8.15-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glycosyl transferase, family 4
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 UDP-N-acetyl-α-D-glucosamine[c] + 1 a dolichyl phosphate[c] => 1 an N-acetyl-α-D-glucosaminyl-diphosphodolichol[c] + 1 UMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-12_005460&oldid=19914"