Difference between revisions of "Ec-06 006760"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.113-RXN 2.1.1.113-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** site-specific DNA-m...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-22...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.113-RXN 2.1.1.113-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P42-PWY P42-PWY] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-224756]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183939 TAX-183939]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183925 TAX-183925]
 
* common name:
 
* common name:
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** site-specific DNA-methyltransferase (cytosine-N4-specific)
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** incomplete reductive TCA cycle
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* ec number:
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** [http://enzyme.expasy.org/EC/2.1.1.113 EC-2.1.1.113]
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* Synonym(s):
 
* Synonym(s):
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** citric acid cycle variant
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** tricarboxylic acid cycle variant
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** TCA cycle variation I
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** incomplete reductive tricarboxylic acid cycle
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''5''' reactions found over '''7''' reactions in the full pathway
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** 1 [[DNA-Cytosines]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[DNA-N4-Methylcytosine]][c] '''+''' 1 [[PROTON]][c]
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* [[FUMHYDR-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 a cytosine in DNA[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 an N4-methylcytosine in DNA[c] '''+''' 1 H+[c]
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*** [[Ec-25_001360]]
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*** [[Ec-23_003460]]
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== Genes associated with this reaction  ==
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** 2 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-esiliculosus_genome]]
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* [[Ec-04_006290]]
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*** [[orthology-aragem]]
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** ESILICULOSUS_GENOME
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* [[MALATE-DEH-RXN]]
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***GO-TERM
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** 2 associated gene(s):
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* [[Ec-09_001730]]
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*** [[Ec-10_006200]]
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** ESILICULOSUS_GENOME
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*** [[Ec-02_003100]]
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***GO-TERM
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** 2 reconstruction source(s) associated:
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* [[Ec-00_002200]]
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*** [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** [[orthology-aragem]]
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***GO-TERM
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* [[PYRUFLAVREDUCT-RXN]]
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== Pathways  ==
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** 3 associated gene(s):
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== Reconstruction information  ==
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*** [[Ec-18_003420]]
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* Category: [[annotation]]
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*** [[Ec-15_004230]]
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** Source: [[annotation-esiliculosus_genome]]
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*** [[Ec-23_002710]]
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*** Tool: [[pathwaytools]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[PYRUVATE-CARBOXYLASE-RXN]]
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** 1 associated gene(s):
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*** [[Ec-03_001890]]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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* [[SUCCCOASYN-RXN]]
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** 2 associated gene(s):
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*** [[Ec-10_000030]]
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*** [[Ec-02_001020]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=R601-RXN R601-RXN]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-224756}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03003 R03003]
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{{#set: taxonomic range=TAX-183939}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-183925}}
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** [http://www.uniprot.org/uniprot/Q04845 Q04845]
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{{#set: common name=incomplete reductive TCA cycle}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=citric acid cycle variant|tricarboxylic acid cycle variant|TCA cycle variation I|incomplete reductive tricarboxylic acid cycle}}
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{{#set: common name=site-specific DNA-methyltransferase (cytosine-N4-specific)}}
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{{#set: reaction found=5}}
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{{#set: ec number=EC-2.1.1.113}}
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{{#set: total reaction=7}}
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{{#set: gene associated=Ec-04_006290|Ec-09_001730|Ec-00_002200}}
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{{#set: completion rate=71.0}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:36, 21 March 2018

Pathway P42-PWY

  • taxonomic range:
  • common name:
    • incomplete reductive TCA cycle
  • Synonym(s):
    • citric acid cycle variant
    • tricarboxylic acid cycle variant
    • TCA cycle variation I
    • incomplete reductive tricarboxylic acid cycle

Reaction(s) found

5 reactions found over 7 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-06_006760&oldid=20027"