Difference between revisions of "P124-PWY"
From metabolic_network
(Created page with "Category:Gene == Gene Ec-10_004110 == * left end position: ** 4196242 * transcription direction: ** POSITIVE * right end position: ** 4209065 * centisome position: ** 64.5...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PMPOXI-RXN PMPOXI-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** pyridoxamine-phosphate ox...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PMPOXI-RXN PMPOXI-RXN] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * common name: | |
| − | ** | + | ** pyridoxamine-phosphate oxidase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/1.4.3.5 EC-1.4.3.5] |
| − | * | + | |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | |||
| − | |||
| − | |||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | ** esiliculosus_genome | + | ** 1 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PYRIDOXAMINE-5P]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PYRIDOXAL_PHOSPHATE]][c] '''+''' 1 [[AMMONIUM]][c] |
| − | *** | + | * With common name(s): |
| − | == Pathways | + | ** 1 H2O[c] '''+''' 1 oxygen[c] '''+''' 1 pyridoxamine 5'-phosphate[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 pyridoxal 5'-phosphate[c] '''+''' 1 ammonium[c] |
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Ec-09_002030]] | ||
| + | ** Source: [[annotation-esiliculosus_genome]] | ||
| + | *** Assignment: GO-TERM | ||
| + | * Gene: [[Ec-01_000340]] | ||
| + | ** Source: [[annotation-esiliculosus_genome]] | ||
| + | *** Assignment: GO-TERM | ||
| + | * Gene: [[Ec-10_006030]] | ||
| + | ** Source: [[annotation-esiliculosus_genome]] | ||
| + | *** Assignment: GO-TERM | ||
| + | == Pathways == | ||
| + | * [[PWY-7204]], pyridoxal 5'-phosphate salvage II (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7204 PWY-7204] | ||
| + | ** '''5''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PLPSAL-PWY]], pyridoxal 5'-phosphate salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PLPSAL-PWY PLPSAL-PWY] | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-esiliculosus_genome]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15817 15817] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R00277 R00277] |
| − | {{#set: | + | * UNIPROT: |
| − | {{#set: | + | ** [http://www.uniprot.org/uniprot/P0AFI7 P0AFI7] |
| + | ** [http://www.uniprot.org/uniprot/Q9JTZ1 Q9JTZ1] | ||
| + | ** [http://www.uniprot.org/uniprot/P44909 P44909] | ||
| + | ** [http://www.uniprot.org/uniprot/P38075 P38075] | ||
| + | ** [http://www.uniprot.org/uniprot/P74211 P74211] | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: common name=pyridoxamine-phosphate oxidase}} | ||
| + | {{#set: ec number=EC-1.4.3.5}} | ||
| + | {{#set: gene associated=Ec-09_002030|Ec-01_000340|Ec-10_006030}} | ||
| + | {{#set: in pathway=PWY-7204|PLPSAL-PWY}} | ||
| + | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-esiliculosus_genome}} | ||
| + | {{#set: reconstruction tool=pathwaytools}} | ||
Revision as of 13:36, 21 March 2018
Contents
Reaction PMPOXI-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- pyridoxamine-phosphate oxidase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 WATER[c] + 1 OXYGEN-MOLECULE[c] + 1 PYRIDOXAMINE-5P[c] => 1 HYDROGEN-PEROXIDE[c] + 1 PYRIDOXAL_PHOSPHATE[c] + 1 AMMONIUM[c]
- With common name(s):
- 1 H2O[c] + 1 oxygen[c] + 1 pyridoxamine 5'-phosphate[c] => 1 hydrogen peroxide[c] + 1 pyridoxal 5'-phosphate[c] + 1 ammonium[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Ec-09_002030
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-01_000340
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-10_006030
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
Pathways
- PWY-7204, pyridoxal 5'-phosphate salvage II (plants): PWY-7204
- 5 reactions found over 9 reactions in the full pathway
- PLPSAL-PWY, pyridoxal 5'-phosphate salvage I: PLPSAL-PWY
- 5 reactions found over 5 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
External links
