Difference between revisions of "RXN-13406"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5661 PWY-5661] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-27...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URACIL-PRIBOSYLTRANS-RXN URACIL-PRIBOSYLTRANS-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
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[[Category:Pathway]]
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[[Category:Reaction]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5661 PWY-5661] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=URACIL-PRIBOSYLTRANS-RXN URACIL-PRIBOSYLTRANS-RXN] ==
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* taxonomic range:
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* direction:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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* common name:
 
* common name:
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** GDP-glucose biosynthesis
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** Uracil phosphoribosyltransferase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.4.2.9 EC-2.4.2.9]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reaction Formula ==
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'''2''' reactions found over '''3''' reactions in the full pathway
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* With identifiers:
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* [[GLUCOKIN-RXN]]
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** 1 [[URACIL]][c] '''+''' 1 [[PRPP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[UMP]][c]
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** 1 associated gene(s):
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* With common name(s):
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*** [[Ec-27_005030]]
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** 1 uracil[c] '''+''' 1 5-phospho-α-D-ribose 1-diphosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 UMP[c]
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** 1 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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* [[PHOSPHOGLUCMUT-RXN]]
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Genes have been associated with this reaction based on different elements listed below.
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** 1 associated gene(s):
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* Gene: [[Ec-03_003570]]
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*** [[Ec-17_001480]]
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** Source: [[annotation-esiliculosus_genome]]
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** 1 reconstruction source(s) associated:
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*** Assignment: EC-NUMBER
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*** [[annotation-esiliculosus_genome]]
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** Source: [[orthology-aragem]]
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== Reaction(s) not found ==
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== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.34-RXN 2.7.7.34-RXN]
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* [[PWY-7183]], pyrimidine nucleobases salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7183 PWY-7183]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: taxonomic range=TAX-2759}}
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* RHEA:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13017 13017]
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{{#set: taxonomic range=TAX-2157}}
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* LIGAND-RXN:
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{{#set: common name=GDP-glucose biosynthesis}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00966 R00966]
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{{#set: reaction found=2}}
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* UNIPROT:
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{{#set: total reaction=3}}
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** [http://www.uniprot.org/uniprot/P0A8F0 P0A8F0]
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{{#set: completion rate=67.0}}
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** [http://www.uniprot.org/uniprot/P39765 P39765]
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** [http://www.uniprot.org/uniprot/Q9CEC9 Q9CEC9]
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** [http://www.uniprot.org/uniprot/P47276 P47276]
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** [http://www.uniprot.org/uniprot/O27186 O27186]
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** [http://www.uniprot.org/uniprot/P43857 P43857]
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** [http://www.uniprot.org/uniprot/O67914 O67914]
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** [http://www.uniprot.org/uniprot/P44722 P44722]
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** [http://www.uniprot.org/uniprot/Q9PN13 Q9PN13]
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** [http://www.uniprot.org/uniprot/P65941 P65941]
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** [http://www.uniprot.org/uniprot/P39149 P39149]
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** [http://www.uniprot.org/uniprot/P18562 P18562]
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** [http://www.uniprot.org/uniprot/P41007 P41007]
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** [http://www.uniprot.org/uniprot/P72753 P72753]
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** [http://www.uniprot.org/uniprot/Q55758 Q55758]
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** [http://www.uniprot.org/uniprot/P93394 P93394]
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** [http://www.uniprot.org/uniprot/O65583 O65583]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Uracil phosphoribosyltransferase}}
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{{#set: ec number=EC-2.4.2.9}}
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{{#set: gene associated=Ec-03_003570}}
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{{#set: in pathway=PWY-7183}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 13:36, 21 March 2018

Reaction URACIL-PRIBOSYLTRANS-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Uracil phosphoribosyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 uracil[c] + 1 5-phospho-α-D-ribose 1-diphosphate[c] => 1 diphosphate[c] + 1 UMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7183, pyrimidine nucleobases salvage I: PWY-7183
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-13406&oldid=20123"