Difference between revisions of "RXN-15468"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIAMINOPIMDECARB-RXN DIAMINOPIMDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** PLP-b...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-371 CPD-371] == * smiles: ** CCCCCCC[CH]=O * inchi key: ** InChIKey=NUJGJRNETVAIRJ-UHFFFAOY...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DIAMINOPIMDECARB-RXN DIAMINOPIMDECARB-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-371 CPD-371] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CCCCCCC[CH]=O
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* inchi key:
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** InChIKey=NUJGJRNETVAIRJ-UHFFFAOYSA-N
 
* common name:
 
* common name:
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** PLP-binding barrel
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** 1-octanal
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/4.1.1.20 EC-4.1.1.20]
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** 128.214   
 
* Synonym(s):
 
* Synonym(s):
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** 1-caprylaldehyde
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** 1-octylaldehyde
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** 1-octaldehyde
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** n-octanal
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[R222-RXN]]
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** 1 [[MESO-DIAMINOPIMELATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[LYS]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 meso-diaminopimelate[c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 L-lysine[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-01_000060]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-09_002410]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-09_002360]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-09_002420]]
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY-5097]], L-lysine biosynthesis VI: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5097 PWY-5097]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-2942]], L-lysine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2942 PWY-2942]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=DAPLYSINESYN-PWY DAPLYSINESYN-PWY]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-2941]], L-lysine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2941 PWY-2941]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* CAS : 124-13-0
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15101 15101]
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* LIPID_MAPS : LMFA06000028
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R00451 R00451]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=454 454]
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* UNIPROT:
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* HMDB : HMDB01140
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** [http://www.uniprot.org/uniprot/P19572 P19572]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P0A5M4 P0A5M4]
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** [http://www.genome.jp/dbget-bin/www_bget?C01545 C01545]
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** [http://www.uniprot.org/uniprot/P44316 P44316]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/P56129 P56129]
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** [http://www.chemspider.com/Chemical-Structure.441.html 441]
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** [http://www.uniprot.org/uniprot/O67262 O67262]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q9JWA6 Q9JWA6]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17935 17935]
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** [http://www.uniprot.org/uniprot/Q9CG26 Q9CG26]
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* METABOLIGHTS : MTBLC17935
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** [http://www.uniprot.org/uniprot/P00861 P00861]
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{{#set: smiles=CCCCCCC[CH]=O}}
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** [http://www.uniprot.org/uniprot/O27390 O27390]
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{{#set: inchi key=InChIKey=NUJGJRNETVAIRJ-UHFFFAOYSA-N}}
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** [http://www.uniprot.org/uniprot/Q9PII5 Q9PII5]
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{{#set: common name=1-octanal}}
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** [http://www.uniprot.org/uniprot/Q58497 Q58497]
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{{#set: molecular weight=128.214    }}
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** [http://www.uniprot.org/uniprot/O29458 O29458]
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{{#set: common name=1-caprylaldehyde|1-octylaldehyde|1-octaldehyde|n-octanal}}
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** [http://www.uniprot.org/uniprot/P41023 P41023]
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{{#set: consumed by=R222-RXN}}
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** [http://www.uniprot.org/uniprot/P23630 P23630]
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** [http://www.uniprot.org/uniprot/P09890 P09890]
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** [http://www.uniprot.org/uniprot/Q55484 Q55484]
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** [http://www.uniprot.org/uniprot/O05321 O05321]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=PLP-binding barrel}}
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{{#set: ec number=EC-4.1.1.20}}
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{{#set: gene associated=Ec-01_000060|Ec-09_002410|Ec-09_002360|Ec-09_002420}}
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{{#set: in pathway=PWY-5097|PWY-2942|DAPLYSINESYN-PWY|PWY-2941}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 13:36, 21 March 2018

Metabolite CPD-371

  • smiles:
    • CCCCCCC[CH]=O
  • inchi key:
    • InChIKey=NUJGJRNETVAIRJ-UHFFFAOYSA-N
  • common name:
    • 1-octanal
  • molecular weight:
    • 128.214
  • Synonym(s):
    • 1-caprylaldehyde
    • 1-octylaldehyde
    • 1-octaldehyde
    • n-octanal

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 124-13-0
  • LIPID_MAPS : LMFA06000028
  • PUBCHEM:
  • HMDB : HMDB01140
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC17935
"CCCCCCC[CH]=O" cannot be used as a page name in this wiki.



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