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| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FPPSYN-RXN FPPSYN-RXN] == | + | == Gene Ec-27_003160 == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| − | * common name:
| + | |
| − | ** Prenyltransferase/squalene oxidase
| + | |
| − | ** Farnesyl pyrophosphate synthase
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/2.5.1.10 EC-2.5.1.10]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | + | ** Esi_0000_0579 |
| | + | ** Esi0000_0579 |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers:
| + | * Reaction: [[RXN1K-87]] |
| − | ** 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[GERANYL-PP]][c] '''=>''' 1 [[FARNESYL-PP]][c] '''+''' 1 [[PPI]][c]
| + | |
| − | * With common name(s):
| + | |
| − | ** 1 isopentenyl diphosphate[c] '''+''' 1 geranyl diphosphate[c] '''=>''' 1 (2E,6E)-farnesyl diphosphate[c] '''+''' 1 diphosphate[c]
| + | |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Ec-07_006170]] | + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Ec-10_003020]]
| + | |
| − | ** ESILICULOSUS_GENOME
| + | |
| − | ***EC-NUMBER
| + | |
| − | * [[Ec-16_004330]]
| + | |
| − | ** [[pantograph]]-[[aragem]]
| + | |
| − | == Pathways ==
| + | |
| − | * [[PWY-7721]], methyl phomopsenoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7721 PWY-7721]
| + | |
| − | ** '''2''' reactions found over '''4''' reactions in the full pathway
| + | |
| − | * [[PWY-7736]], stellatic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7736 PWY-7736]
| + | |
| − | ** '''3''' reactions found over '''8''' reactions in the full pathway
| + | |
| − | * [[PWY-5123]], trans, trans-farnesyl diphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5123 PWY-5123]
| + | |
| − | ** '''3''' reactions found over '''3''' reactions in the full pathway
| + | |
| − | * [[PWY-7102]], bisabolene biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7102 PWY-7102]
| + | |
| − | ** '''3''' reactions found over '''6''' reactions in the full pathway
| + | |
| − | * [[PWY-6859]], all-trans-farnesol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6859 PWY-6859]
| + | |
| − | ** '''3''' reactions found over '''4''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * Category: [[orthology]]
| + | |
| | ** Source: [[orthology-aragem]] | | ** Source: [[orthology-aragem]] |
| − | *** Tool: [[pantograph]]
| + | == Pathways associated == |
| − | * Category: [[annotation]]
| + | |
| − | ** Source: [[annotation-esiliculosus_genome]]
| + | |
| − | *** Tool: [[pathwaytools]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: common name=Esi_0000_0579|Esi0000_0579}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19361 19361]
| + | {{#set: reaction associated=RXN1K-87}} |
| − | * LIGAND-RXN:
| + | |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R02003 R02003]
| + | |
| − | * UNIPROT:
| + | |
| − | ** [http://www.uniprot.org/uniprot/P08524 P08524]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P05369 P05369]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P14324 P14324]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9CH81 Q9CH81]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9PM32 Q9PM32]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P45204 P45204]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9JSM0 Q9JSM0]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P49350 P49350]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P22939 P22939]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q08291 Q08291]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P49349 P49349]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q09152 Q09152]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P49351 P49351]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P49352 P49352]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q43315 Q43315]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O24241 O24241]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O24242 O24242]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q92334 Q92334]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q92218 Q92218]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q92235 Q92235]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q92250 Q92250]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q8L7F4 Q8L7F4]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P49353 P49353]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O04882 O04882]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O65004 O65004]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O14230 O14230]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}}
| + | |
| − | {{#set: common name=Prenyltransferase/squalene oxidase}} | + | |
| − | {{#set: common name=Farnesyl pyrophosphate synthase}} | + | |
| − | {{#set: ec number=EC-2.5.1.10}}
| + | |
| − | {{#set: gene associated=Ec-07_006170|Ec-10_003020|Ec-16_004330}}
| + | |
| − | {{#set: in pathway=PWY-7721|PWY-7736|PWY-5123|PWY-7102|PWY-6859}}
| + | |
| − | {{#set: reconstruction category=orthology|annotation}}
| + | |
| − | {{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
| + | |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| + | |
