Difference between revisions of "Ec-19 000030"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7775 RXN-7775] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
 
(Created page with "Category:Gene == Gene Ec-08_001460 == * left end position: ** 1555246 * transcription direction: ** NEGATIVE * right end position: ** 1572265 * centisome position: ** 23.2...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7775 RXN-7775] ==
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== Gene Ec-08_001460 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 1555246
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.14.11.9 EC-1.14.11.9]
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** NEGATIVE
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* right end position:
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** 1572265
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* centisome position:
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** 23.222797   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0007_0039
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** Esi0007_0039
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** TOP4B
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[5.99.1.3-RXN]]
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** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-6994]][c] '''=>''' 1 [[SUC]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CPD-474]][c]
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** esiliculosus_genome
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* With common name(s):
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***go-term
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** 1 2-oxoglutarate[c] '''+''' 1 oxygen[c] '''+''' 1 (2S)-eriodictyol[c] '''=>''' 1 succinate[c] '''+''' 1 CO2[c] '''+''' 1 (+)-taxifolin[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-19_002760]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-08_003510]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-19_002750]]
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** [[pantograph]]-[[aragem]]
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== Pathways ==
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* [[PWY1F-823]], leucopelargonidin and leucocyanidin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-823 PWY1F-823]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6787]], flavonoid biosynthesis (in equisetum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6787 PWY-6787]
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** '''6''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aragem]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=1555246}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03640 R03640]
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{{#set: transcription direction=NEGATIVE}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=1572265}}
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{{#set: ec number=EC-1.14.11.9}}
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{{#set: centisome position=23.222797    }}
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{{#set: gene associated=Ec-19_002760|Ec-08_003510|Ec-19_002750}}
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{{#set: common name=Esi_0007_0039|Esi0007_0039|TOP4B}}
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{{#set: in pathway=PWY1F-823|PWY-6787}}
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{{#set: reaction associated=5.99.1.3-RXN}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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Revision as of 20:40, 17 March 2018

Gene Ec-08_001460

  • left end position:
    • 1555246
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 1572265
  • centisome position:
    • 23.222797
  • Synonym(s):
    • Esi_0007_0039
    • Esi0007_0039
    • TOP4B

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-19_000030&oldid=9884"