Difference between revisions of "RXN-12575"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9527 RXN-9527] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-decanoyl-[acyl-carrier...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GAMA-TOCOPHEROL GAMA-TOCOPHEROL] == * smiles: ** CC(C)CCCC(C)CCCC(C)CCCC1(C)(CCC2(=CC(O)=C(C)C(...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9527 RXN-9527] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=GAMA-TOCOPHEROL GAMA-TOCOPHEROL] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(C)CCCC(C)CCCC(C)CCCC1(C)(CCC2(=CC(O)=C(C)C(=C(O1)2)C))
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* inchi key:
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** InChIKey=QUEDXNHFTDJVIY-DQCZWYHMSA-N
 
* common name:
 
* common name:
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** 3-oxo-decanoyl-[acyl-carrier protein] synthase
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** γ-tocopherol
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** Beta-ketoacyl synthase, N-terminal
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* molecular weight:
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** Thiolase-like, subgroup
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** 416.686   
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** beta-ketoacyl synthase, partial
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** 3-oxoacyl-[acyl-carrier-protein] synthase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
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* Synonym(s):
 
* Synonym(s):
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** 7,8-dimethyltocol
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[TOCOPHEROL-O-METHYLTRANSFERASE-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[Octanoyl-ACPs]][c] '''+''' 1 [[MALONYL-ACP]][c] '''=>''' 1 [[3-oxo-decanoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[RXN-2543]]
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** 1 H+[c] '''+''' 1 an octanoyl-[acp][c] '''+''' 1 a malonyl-[acp][c] '''=>''' 1 a 3-oxo-decanoyl-[acp][c] '''+''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-12_000640]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-27_003480]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-27_002090]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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** [[pantograph]]-[[aragem]]
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* [[Ec-12_000650]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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** [[pantograph]]-[[aragem]]
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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** '''28''' reactions found over '''31''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aragem]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* PUBCHEM:
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{{#set: common name=3-oxo-decanoyl-[acyl-carrier protein] synthase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=92729 92729]
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{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
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* CHEMSPIDER:
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{{#set: common name=Thiolase-like, subgroup}}
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** [http://www.chemspider.com/Chemical-Structure.83708.html 83708]
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{{#set: common name=beta-ketoacyl synthase, partial}}
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* CHEBI:
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{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=18185 18185]
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{{#set: ec number=EC-2.3.1.41}}
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* METABOLIGHTS : MTBLC18185
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{{#set: gene associated=Ec-12_000640|Ec-27_003480|Ec-27_002090|Ec-12_000650}}
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* LIGAND-CPD:
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{{#set: in pathway=PWY-5971}}
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** [http://www.genome.jp/dbget-bin/www_bget?C02483 C02483]
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{{#set: reconstruction category=orthology}}
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{{#set: smiles=CC(C)CCCC(C)CCCC(C)CCCC1(C)(CCC2(=CC(O)=C(C)C(=C(O1)2)C))}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: inchi key=InChIKey=QUEDXNHFTDJVIY-DQCZWYHMSA-N}}
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{{#set: reconstruction source=aragem}}
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{{#set: common name=γ-tocopherol}}
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{{#set: reconstruction category=annotation}}
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{{#set: molecular weight=416.686    }}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=7,8-dimethyltocol}}
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{{#set: reconstruction source=esiliculosus_genome}}
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{{#set: consumed by=TOCOPHEROL-O-METHYLTRANSFERASE-RXN}}
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{{#set: produced by=RXN-2543}}

Revision as of 21:23, 17 March 2018

Metabolite GAMA-TOCOPHEROL

  • smiles:
    • CC(C)CCCC(C)CCCC(C)CCCC1(C)(CCC2(=CC(O)=C(C)C(=C(O1)2)C))
  • inchi key:
    • InChIKey=QUEDXNHFTDJVIY-DQCZWYHMSA-N
  • common name:
    • γ-tocopherol
  • molecular weight:
    • 416.686
  • Synonym(s):
    • 7,8-dimethyltocol

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links




Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-12575&oldid=8730"