Difference between revisions of "CPD-564"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGININE--TRNA-LIGASE-RXN ARGININE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10659 RXN-10659] == * direction: ** LEFT-TO-RIGHT * common name: ** NAD(P)-binding domain * ec...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGININE--TRNA-LIGASE-RXN ARGININE--TRNA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10659 RXN-10659] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** DALR anticodon binding
+
** NAD(P)-binding domain
−
** Arginyl-tRNA Synthetase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.1.1.19 EC-6.1.1.19]
+
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[ARG]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[ARG-tRNAs]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Charged-ARG-tRNAs]][c] '''+''' 1 [[AMP]][c]
+
** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[3-oxo-cis-D9-hexadecenoyl-ACPs]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[3-hydroxy-cis-D9-hexaecenoyl-ACPs]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 L-arginine[c] '''+''' 1 ATP[c] '''+''' 1 a tRNAarg[c] '''=>''' 1 diphosphate[c] '''+''' 1 an L-arginyl-[tRNAarg][c] '''+''' 1 AMP[c]
+
** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 a 3-oxo-cis-Δ9-hexadecenoyl-[acp][c] '''=>''' 1 NADP+[c] '''+''' 1 a (3R)-3-hydroxy cis Δ9-hexadecenoyl-[acp][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-01_003640]]
+
* Gene: [[Ec-01_007100]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Ec-03_001410]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
+
* [[PWY-6282]], palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6282 PWY-6282]
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 32: Line 28:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20301 20301]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03646 R03646]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P40329 P40329]
 
−
** [http://www.uniprot.org/uniprot/P35868 P35868]
 
−
** [http://www.uniprot.org/uniprot/P43832 P43832]
 
−
** [http://www.uniprot.org/uniprot/O51540 O51540]
 
−
** [http://www.uniprot.org/uniprot/O67068 O67068]
 
−
** [http://www.uniprot.org/uniprot/O59147 O59147]
 
−
** [http://www.uniprot.org/uniprot/O83803 O83803]
 
−
** [http://www.uniprot.org/uniprot/Q9ZE81 Q9ZE81]
 
−
** [http://www.uniprot.org/uniprot/Q9PNC0 Q9PNC0]
 
−
** [http://www.uniprot.org/uniprot/Q9X0H8 Q9X0H8]
 
−
** [http://www.uniprot.org/uniprot/P46906 P46906]
 
−
** [http://www.uniprot.org/uniprot/Q57689 Q57689]
 
−
** [http://www.uniprot.org/uniprot/O27496 O27496]
 
−
** [http://www.uniprot.org/uniprot/Q9JTM7 Q9JTM7]
 
−
** [http://www.uniprot.org/uniprot/Q9CE12 Q9CE12]
 
−
** [http://www.uniprot.org/uniprot/P56128 P56128]
 
−
** [http://www.uniprot.org/uniprot/P47618 P47618]
 
−
** [http://www.uniprot.org/uniprot/Q9ZMB9 Q9ZMB9]
 
−
** [http://www.uniprot.org/uniprot/Q08888 Q08888]
 
−
** [http://www.uniprot.org/uniprot/P54136 P54136]
 
−
** [http://www.uniprot.org/uniprot/P38714 P38714]
 
−
** [http://www.uniprot.org/uniprot/Q05506 Q05506]
 
−
** [http://www.uniprot.org/uniprot/P75222 P75222]
 
−
** [http://www.uniprot.org/uniprot/P11875 P11875]
 
−
** [http://www.uniprot.org/uniprot/O23247 O23247]
 
−
** [http://www.uniprot.org/uniprot/O74781 O74781]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=DALR anticodon binding}}
+
{{#set: common name=NAD(P)-binding domain}}
−
{{#set: common name=Arginyl-tRNA Synthetase}}
+
{{#set: ec number=EC-1.1.1.100}}
−
{{#set: ec number=EC-6.1.1.19}}
+
{{#set: gene associated=Ec-01_007100}}
−
{{#set: gene associated=Ec-01_003640|Ec-03_001410}}
+
{{#set: in pathway=PWY-6282}}
−
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:39, 21 March 2018

Reaction RXN-10659

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • NAD(P)-binding domain
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6282, palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate): PWY-6282
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=CPD-564&oldid=20446"