Difference between revisions of "EPISTEROL"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15122 RXN-15122] == * direction: ** LEFT-TO-RIGHT * common name: ** Tryptophan synthase beta su...")
(Created page with "Category:Gene == Gene Ec-04_003730 == * left end position: ** 3812194 * transcription direction: ** NEGATIVE * right end position: ** 3820426 * centisome position: ** 58.5...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15122 RXN-15122] ==
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== Gene Ec-04_003730 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3812194
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* common name:
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* transcription direction:
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** Tryptophan synthase beta subunit-like PLP-dependent enzyme
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** NEGATIVE
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** L-threonine ammonia-lyase
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* right end position:
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** 3820426
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* centisome position:
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** 58.5424   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0080_0009
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** Esi0080_0009
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** GanAB
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[3.2.1.84-RXN]]
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** 1 [[THR]][c] '''=>''' 1 [[CPD-15056]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c]
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* With common name(s):
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** 1 L-threonine[c] '''=>''' 1 (2Z)-2-aminobut-2-enoate[c] '''+''' 1 H+[c] '''+''' 1 H2O[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-06_007490]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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* [[Ec-03_001910]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways  ==
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* [[ILEUSYN-PWY]], L-isoleucine biosynthesis I (from threonine): [http://metacyc.org/META/NEW-IMAGE?object=ILEUSYN-PWY ILEUSYN-PWY]
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** '''7''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-5826]], hypoglycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5826 PWY-5826]
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** '''4''' reactions found over '''14''' reactions in the full pathway
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* [[PWY-5437]], L-threonine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5437 PWY-5437]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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* Reaction: [[ALPHAGALACTOSID-RXN]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-15910]]
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** Source: [[orthology-aragem]]
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[PWY-842]]
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* [[PWY0-1301]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=3812194}}
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{{#set: common name=Tryptophan synthase beta subunit-like PLP-dependent enzyme}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=L-threonine ammonia-lyase}}
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{{#set: right end position=3820426}}
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{{#set: gene associated=Ec-06_007490|Ec-03_001910}}
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{{#set: centisome position=58.5424    }}
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{{#set: in pathway=ILEUSYN-PWY|PWY-5826|PWY-5437}}
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{{#set: common name=Esi_0080_0009|Esi0080_0009|GanAB}}
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{{#set: reconstruction category=annotation}}
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{{#set: reaction associated=3.2.1.84-RXN|ALPHAGALACTOSID-RXN|RXN-15910}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: pathway associated=PWY-842|PWY0-1301}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:41, 21 March 2018

Gene Ec-04_003730

  • left end position:
    • 3812194
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3820426
  • centisome position:
    • 58.5424
  • Synonym(s):
    • Esi_0080_0009
    • Esi0080_0009
    • GanAB

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=EPISTEROL&oldid=20707"