Difference between revisions of "CPD-236"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.72-RXN 2.1.1.72-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** EsV-1-129 * ec number...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINKIN-RXN RIBOFLAVINKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** riboflavin...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.1.1.72-RXN 2.1.1.72-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINKIN-RXN RIBOFLAVINKIN-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** EsV-1-129
+
** riboflavin kinase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.1.1.72 EC-2.1.1.72]
+
** [http://enzyme.expasy.org/EC/2.7.1.26 EC-2.7.1.26]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[DNA-Adenines]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[DNA-6-Methyl-Amino-Purines]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[RIBOFLAVIN]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[FMN]][c]
 
* With common name(s):
 
* With common name(s):
−
**
+
** 1 riboflavin[c] '''+''' 1 ATP[c] '''=>''' 1 ADP[c] '''+''' 1 H+[c] '''+''' 1 FMN[c]
 +
 
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-06_005560]]
+
* Gene: [[Ec-04_001490]]
−
** ESILICULOSUS_GENOME
+
** Source: [[orthology-aragem]]
−
***EC-NUMBER
+
* Gene: [[Ec-04_004280]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-10_002950]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-14_005260]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY66-366]], flavin biosynthesis IV (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-366 PWY66-366]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
 +
** '''6''' reactions found over '''9''' reactions in the full pathway
 +
* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5523]], 5,6-dimethylbenzimidazole biosynthesis I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5523 PWY-5523]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14357 14357]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02961 R02961]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00549 R00549]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q7B7V5 Q7B7V5]
+
** [http://www.uniprot.org/uniprot/Q9JVY5 Q9JVY5]
−
** [http://www.uniprot.org/uniprot/P44414 P44414]
+
** [http://www.uniprot.org/uniprot/Q9PHS7 Q9PHS7]
−
** [http://www.uniprot.org/uniprot/Q57168 Q57168]
+
** [http://www.uniprot.org/uniprot/Q59263 Q59263]
−
** [http://www.uniprot.org/uniprot/Q9PIS1 Q9PIS1]
+
−
** [http://www.uniprot.org/uniprot/P44431 P44431]
+
−
** [http://www.uniprot.org/uniprot/P95510 P95510]
+
−
** [http://www.uniprot.org/uniprot/P29749 P29749]
+
−
** [http://www.uniprot.org/uniprot/P14385 P14385]
+
−
** [http://www.uniprot.org/uniprot/P43422 P43422]
+
−
** [http://www.uniprot.org/uniprot/Q47911 Q47911]
+
−
** [http://www.uniprot.org/uniprot/P21311 P21311]
+
−
** [http://www.uniprot.org/uniprot/P14751 P14751]
+
−
** [http://www.uniprot.org/uniprot/P14827 P14827]
+
−
** [http://www.uniprot.org/uniprot/P25240 P25240]
+
−
** [http://www.uniprot.org/uniprot/P25239 P25239]
+
−
** [http://www.uniprot.org/uniprot/P29538 P29538]
+
−
** [http://www.uniprot.org/uniprot/Q03055 Q03055]
+
−
** [http://www.uniprot.org/uniprot/Q51829 Q51829]
+
−
** [http://www.uniprot.org/uniprot/P25238 P25238]
+
−
** [http://www.uniprot.org/uniprot/P35516 P35516]
+
−
** [http://www.uniprot.org/uniprot/P33563 P33563]
+
−
** [http://www.uniprot.org/uniprot/P43641 P43641]
+
−
** [http://www.uniprot.org/uniprot/P45454 P45454]
+
−
** [http://www.uniprot.org/uniprot/P50193 P50193]
+
−
** [http://www.uniprot.org/uniprot/Q56004 Q56004]
+
−
** [http://www.uniprot.org/uniprot/P73682 P73682]
+
−
** [http://www.uniprot.org/uniprot/P31118 P31118]
+
−
** [http://www.uniprot.org/uniprot/O41063 O41063]
+
−
** [http://www.uniprot.org/uniprot/P12427 P12427]
+
−
** [http://www.uniprot.org/uniprot/P04392 P04392]
+
−
** [http://www.uniprot.org/uniprot/P0AEE8 P0AEE8]
+
−
** [http://www.uniprot.org/uniprot/P08957 P08957]
+
−
** [http://www.uniprot.org/uniprot/P00472 P00472]
+
−
** [http://www.uniprot.org/uniprot/P04393 P04393]
+
−
** [http://www.uniprot.org/uniprot/P00473 P00473]
+
−
** [http://www.uniprot.org/uniprot/P24582 P24582]
+
−
** [http://www.uniprot.org/uniprot/P00474 P00474]
+
−
** [http://www.uniprot.org/uniprot/P04043 P04043]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=EsV-1-129}}
+
{{#set: common name=riboflavin kinase}}
−
{{#set: ec number=EC-2.1.1.72}}
+
{{#set: ec number=EC-2.7.1.26}}
−
{{#set: gene associated=Ec-06_005560}}
+
{{#set: gene associated=Ec-04_001490|Ec-04_004280|Ec-10_002950|Ec-14_005260}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PWY66-366|PWY-6168|RIBOSYN2-PWY|PWY-5523}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 13:41, 21 March 2018

Reaction RIBOFLAVINKIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • riboflavin kinase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 riboflavin[c] + 1 ATP[c] => 1 ADP[c] + 1 H+[c] + 1 FMN[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY66-366, flavin biosynthesis IV (mammalian): PWY66-366
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6168, flavin biosynthesis III (fungi): PWY-6168
    • 6 reactions found over 9 reactions in the full pathway
  • RIBOSYN2-PWY, flavin biosynthesis I (bacteria and plants): RIBOSYN2-PWY
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-5523, 5,6-dimethylbenzimidazole biosynthesis I (aerobic): PWY-5523
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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