Difference between revisions of "RNASE-III-PROCESSING-PRODUCT-MRNA"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12200 RXN-12200] == * direction: ** LEFT-TO-RIGHT * common name: ** Apyrase * ec number: ** [ht...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLMURAMATEDEHYDROG-RXN UDPNACETYLMURAMATEDEHYDROG-RXN] == * direction: ** LEFT-TO-RIGHT * c...") |
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Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLMURAMATEDEHYDROG-RXN UDPNACETYLMURAMATEDEHYDROG-RXN] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
− | ** | + | ** UDP-N-acetylmuramate dehydrogenase |
* ec number: | * ec number: | ||
− | ** [http://enzyme.expasy.org/EC/3 | + | ** [http://enzyme.expasy.org/EC/1.3.1.98 EC-1.3.1.98] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** | + | ** 1 [[UDP-ACETYL-CARBOXYVINYL-GLUCOSAMINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[UDP-N-ACETYLMURAMATE]][c] '''+''' 1 [[NADP]][c] |
* With common name(s): | * With common name(s): | ||
− | ** | + | ** 1 UDP-N-acetyl-α-D-glucosamine-enolpyruvate[c] '''+''' 1 H+[c] '''+''' 1 NADPH[c] '''=>''' 1 UDP-N-acetyl-α-D-muramate[c] '''+''' 1 NADP+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * [[Ec- | + | * Gene: [[Ec-16_002060]] |
− | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
− | *** | + | *** Assignment: GO-TERM |
+ | * Gene: [[Ec-26_003750]] | ||
+ | ** Source: [[annotation-esiliculosus_genome]] | ||
+ | *** Assignment: GO-TERM | ||
+ | * Gene: [[Ec-03_000110]] | ||
+ | ** Source: [[annotation-esiliculosus_genome]] | ||
+ | *** Assignment: GO-TERM | ||
+ | * Gene: [[Ec-19_003080]] | ||
+ | ** Source: [[annotation-esiliculosus_genome]] | ||
+ | *** Assignment: GO-TERM | ||
+ | * Gene: [[Ec-21_001860]] | ||
+ | ** Source: [[annotation-esiliculosus_genome]] | ||
+ | *** Assignment: GO-TERM | ||
+ | * Gene: [[Ec-03_000480]] | ||
+ | ** Source: [[annotation-esiliculosus_genome]] | ||
+ | *** Assignment: GO-TERM | ||
+ | * Gene: [[Ec-09_002930]] | ||
+ | ** Source: [[annotation-esiliculosus_genome]] | ||
+ | *** Assignment: GO-TERM | ||
== Pathways == | == Pathways == | ||
− | * [[PWY- | + | * [[PWY-6386]], UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6386 PWY-6386] |
− | ** ''' | + | ** '''1''' reactions found over '''8''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-6387]], UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6387 PWY-6387] |
− | ** ''' | + | ** '''1''' reactions found over '''8''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
Line 30: | Line 48: | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12248 12248] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R03192 R03192] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PM01 Q9PM01] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JV28 Q9JV28] | ||
+ | ** [http://www.uniprot.org/uniprot/P44605 P44605] | ||
+ | ** [http://www.uniprot.org/uniprot/P08373 P08373] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
− | {{#set: common name= | + | {{#set: common name=UDP-N-acetylmuramate dehydrogenase}} |
− | {{#set: ec number=EC-3 | + | {{#set: ec number=EC-1.3.1.98}} |
− | {{#set: gene associated=Ec- | + | {{#set: gene associated=Ec-16_002060|Ec-26_003750|Ec-03_000110|Ec-19_003080|Ec-21_001860|Ec-03_000480|Ec-09_002930}} |
− | {{#set: in pathway=PWY- | + | {{#set: in pathway=PWY-6386|PWY-6387}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-esiliculosus_genome}} | {{#set: reconstruction source=annotation-esiliculosus_genome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} |
Revision as of 13:41, 21 March 2018
Contents
Reaction UDPNACETYLMURAMATEDEHYDROG-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- UDP-N-acetylmuramate dehydrogenase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 UDP-ACETYL-CARBOXYVINYL-GLUCOSAMINE[c] + 1 PROTON[c] + 1 NADPH[c] => 1 UDP-N-ACETYLMURAMATE[c] + 1 NADP[c]
- With common name(s):
- 1 UDP-N-acetyl-α-D-glucosamine-enolpyruvate[c] + 1 H+[c] + 1 NADPH[c] => 1 UDP-N-acetyl-α-D-muramate[c] + 1 NADP+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Ec-16_002060
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-26_003750
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-03_000110
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-19_003080
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-21_001860
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-03_000480
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
- Gene: Ec-09_002930
- Source: annotation-esiliculosus_genome
- Assignment: GO-TERM
- Source: annotation-esiliculosus_genome
Pathways
- PWY-6386, UDP-N-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing): PWY-6386
- 1 reactions found over 8 reactions in the full pathway
- PWY-6387, UDP-N-acetylmuramoyl-pentapeptide biosynthesis I (meso-diaminopimelate containing): PWY-6387
- 1 reactions found over 8 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
External links