Difference between revisions of "RXN1G-1437"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DETHIOBIOTIN-SYN-RXN DETHIOBIOTIN-SYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Bifun...")
(Created page with "Category:Gene == Gene Ec-02_000470 == * left end position: ** 448045 * transcription direction: ** NEGATIVE * right end position: ** 455672 * centisome position: ** 6.8636...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DETHIOBIOTIN-SYN-RXN DETHIOBIOTIN-SYN-RXN] ==
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== Gene Ec-02_000470 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 448045
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* common name:
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* transcription direction:
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** Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/6.3.3.3 EC-6.3.3.3]
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** 455672
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* centisome position:
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** 6.8636546   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0083_0078
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** Esi0083_0078
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** CAT
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[CATAL-RXN]]
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** 1 [[DIAMINONONANOATE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[DETHIOBIOTIN]][c] '''+''' 1 [[ADP]][c] '''+''' 3 [[PROTON]][c] '''+''' 1 [[Pi]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 7,8-diaminopelargonate[c] '''+''' 1 CO2[c] '''+''' 1 ATP[c] '''=>''' 1 dethiobiotin[c] '''+''' 1 ADP[c] '''+''' 3 H+[c] '''+''' 1 phosphate[c]
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* Reaction: [[PEROXID-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: go-term
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-14189]]
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* [[Ec-01_005750]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: ec-number
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***AUTOMATED-NAME-MATCH
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* Reaction: [[RXN-14240]]
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== Pathways  ==
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY0-1507]], biotin biosynthesis from 8-amino-7-oxononanoate I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1507 PWY0-1507]
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*** Assignment: go-term
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* Reaction: [[RXN-15288]]
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* [[PWY-7380]], biotin biosynthesis from 8-amino-7-oxononanoate II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7380 PWY-7380]
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** Source: [[annotation-esiliculosus_genome]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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*** Assignment: go-term
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== Reconstruction information  ==
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* Reaction: [[RXN-17352]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN-8635]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN-8667]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXN66-1]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7214]]
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* [[PWY-6824]]
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* [[PWY66-162]]
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* [[DETOX1-PWY]]
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* [[PWY-7445]]
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* [[DETOX1-PWY-1]]
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* [[PWY-5469]]
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* [[PWY-5506]]
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* [[PWY-5466]]
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* [[PWY-5461]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=448045}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15805 15805]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=455672}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03182 R03182]
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{{#set: centisome position=6.8636546    }}
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* UNIPROT:
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{{#set: common name=Esi_0083_0078|Esi0083_0078|CAT}}
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** [http://www.uniprot.org/uniprot/Q9JV95 Q9JV95]
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{{#set: reaction associated=CATAL-RXN|PEROXID-RXN|RXN-14189|RXN-14240|RXN-15288|RXN-17352|RXN-8635|RXN-8667|RXN66-1}}
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** [http://www.uniprot.org/uniprot/Q9PIJ1 Q9PIJ1]
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{{#set: pathway associated=PWY-7214|PWY-6824|PWY66-162|DETOX1-PWY|PWY-7445|DETOX1-PWY-1|PWY-5469|PWY-5506|PWY-5466|PWY-5461}}
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** [http://www.uniprot.org/uniprot/P46397 P46397]
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** [http://www.uniprot.org/uniprot/P22818 P22818]
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** [http://www.uniprot.org/uniprot/P13000 P13000]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase}}
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{{#set: ec number=EC-6.3.3.3}}
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{{#set: gene associated=Ec-01_005750}}
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{{#set: in pathway=PWY0-1507|PWY-7380}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:41, 21 March 2018

Gene Ec-02_000470

  • left end position:
    • 448045
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 455672
  • centisome position:
    • 6.8636546
  • Synonym(s):
    • Esi_0083_0078
    • Esi0083_0078
    • CAT

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN1G-1437&oldid=20827"