Difference between revisions of "FORMYLTHFGLUSYNTH-RXN"

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(Created page with "Category:Gene == Gene Ec-02_000470 == * left end position: ** 448045 * transcription direction: ** NEGATIVE * right end position: ** 455672 * centisome position: ** 6.8636...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17352 RXN-17352] == * direction: ** LEFT-TO-RIGHT * common name: ** peroxidase * ec number: **...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-02_000470 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17352 RXN-17352] ==
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* left end position:
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* direction:
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** 448045
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
−
** NEGATIVE
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** peroxidase
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* right end position:
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* ec number:
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** 455672
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** [http://enzyme.expasy.org/EC/1.11.1.7 EC-1.11.1.7]
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* centisome position:
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** 6.8636546   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0083_0078
 
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** Esi0083_0078
 
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** CAT
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[CATAL-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 2 [[CONIFERYL-ALCOHOL]][c] '''=>''' 2 [[WATER]][c] '''+''' 2 [[CPD-18761]][c]
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***ec-number
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* With common name(s):
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* [[PEROXID-RXN]]
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** 1 hydrogen peroxide[c] '''+''' 2 coniferyl alcohol[c] '''=>''' 2 H2O[c] '''+''' 2 coniferyl alcohol radical[c]
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** esiliculosus_genome
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***go-term
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== Genes associated with this reaction  ==
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* [[RXN-14189]]
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Genes have been associated with this reaction based on different elements listed below.
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** esiliculosus_genome
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* Gene: [[Ec-24_002370]]
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***ec-number
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-14240]]
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*** Assignment: GO-TERM
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** esiliculosus_genome
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* Gene: [[Ec-00_008250]]
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***go-term
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-15288]]
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*** Assignment: GO-TERM
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** esiliculosus_genome
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* Gene: [[Ec-02_001740]]
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***go-term
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-17352]]
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*** Assignment: GO-TERM
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** esiliculosus_genome
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* Gene: [[Ec-17_002450]]
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***go-term
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-8635]]
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*** Assignment: GO-TERM
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** esiliculosus_genome
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* Gene: [[Ec-00_008210]]
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***go-term
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN-8667]]
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*** Assignment: GO-TERM
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** esiliculosus_genome
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* Gene: [[Ec-17_002430]]
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***automated-name-match
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** Source: [[annotation-esiliculosus_genome]]
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* [[RXN66-1]]
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*** Assignment: GO-TERM
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** esiliculosus_genome
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* Gene: [[Ec-02_003170]]
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***ec-number
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** Source: [[annotation-esiliculosus_genome]]
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== Pathways associated ==
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*** Assignment: GO-TERM
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* [[PWY-7214]]
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* Gene: [[Ec-19_000230]]
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* [[PWY-7445]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY66-162]]
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*** Assignment: GO-TERM
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* [[DETOX1-PWY]]
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* Gene: [[Ec-24_002030]]
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* [[PWY-6824]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[DETOX1-PWY-1]]
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*** Assignment: GO-TERM
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* [[PWY-5469]]
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* Gene: [[Ec-19_001450]]
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* [[PWY-5506]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-5466]]
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*** Assignment: GO-TERM
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* [[PWY-5461]]
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* Gene: [[Ec-14_002880]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-14_006530]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-02_001880]]
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** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-02_000470]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-05_003380]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-28_003740]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-20_002770]]
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** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-00_008240]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
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* Gene: [[Ec-00_008220]]
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** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
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* Gene: [[Ec-08_006020]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-11_003410]]
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** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
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* Gene: [[Ec-11_001530]]
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** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
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* Gene: [[Ec-02_001210]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-06_003550]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-27_004950]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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* Gene: [[Ec-26_000310]]
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** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-00_010030]]
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** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-05_002520]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-16_000240]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-04_004690]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
== Pathways  ==
 +
* [[PWY-6824]], justicidin B biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6824 PWY-6824]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5466]], matairesinol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5466 PWY-5466]
 +
** '''1''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-5469]], sesamin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5469 PWY-5469]
 +
** '''1''' reactions found over '''8''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=448045}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=peroxidase}}
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{{#set: right end position=455672}}
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{{#set: ec number=EC-1.11.1.7}}
−
{{#set: centisome position=6.8636546    }}
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{{#set: gene associated=Ec-24_002370|Ec-00_008250|Ec-02_001740|Ec-17_002450|Ec-00_008210|Ec-17_002430|Ec-02_003170|Ec-19_000230|Ec-24_002030|Ec-19_001450|Ec-14_002880|Ec-14_006530|Ec-02_001880|Ec-02_000470|Ec-05_003380|Ec-28_003740|Ec-20_002770|Ec-00_008240|Ec-00_008220|Ec-08_006020|Ec-11_003410|Ec-11_001530|Ec-02_001210|Ec-06_003550|Ec-27_004950|Ec-26_000310|Ec-00_010030|Ec-05_002520|Ec-16_000240|Ec-04_004690}}
−
{{#set: common name=Esi_0083_0078|Esi0083_0078|CAT}}
+
{{#set: in pathway=PWY-6824|PWY-5466|PWY-5469}}
−
{{#set: reaction associated=CATAL-RXN|PEROXID-RXN|RXN-14189|RXN-14240|RXN-15288|RXN-17352|RXN-8635|RXN-8667|RXN66-1}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: pathway associated=PWY-7214|PWY-7445|PWY66-162|DETOX1-PWY|PWY-6824|DETOX1-PWY-1|PWY-5469|PWY-5506|PWY-5466|PWY-5461}}
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:42, 21 March 2018

Reaction RXN-17352

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • peroxidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6824, justicidin B biosynthesis: PWY-6824
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-5466, matairesinol biosynthesis: PWY-5466
    • 1 reactions found over 10 reactions in the full pathway
  • PWY-5469, sesamin biosynthesis: PWY-5469
    • 1 reactions found over 8 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=FORMYLTHFGLUSYNTH-RXN&oldid=20862"