Difference between revisions of "C4"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MYO-INOSITOL-2-DEHYDROGENASE-RXN MYO-INOSITOL-2-DEHYDROGENASE-RXN] == * direction: ** REVERSIBLE *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.24.59-RXN 3.4.24.59-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Mitochondrial inter...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MYO-INOSITOL-2-DEHYDROGENASE-RXN MYO-INOSITOL-2-DEHYDROGENASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.24.59-RXN 3.4.24.59-RXN] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** oxidoreductase, NAD-binding, myo-inositol 2-dehydrogenase
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** Mitochondrial intermediate peptidase (N-terminal)
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** Inositol 2-dehydrogenase
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−
** Oxidoreductase, C-terminal
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* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.1.1.18 EC-1.1.1.18]
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** [http://enzyme.expasy.org/EC/3.4.24.59 EC-3.4.24.59]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[MYO-INOSITOL]][c] '''<=>''' 1 [[CPD-14808]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
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** 1 [[mitochondrial-intermediate-protein]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Octapeptides]][c] '''+''' 1 [[mature-protein]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 myo-inositol[c] '''<=>''' 1 scyllo-inosose[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
+
** 1 mitochondrial intermediate protein[c] '''+''' 1 H2O[c] '''=>''' 1 an octapeptide[c] '''+''' 1 a mature protein[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-01_006070]]
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* Gene: [[Ec-28_002150]]
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** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
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*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Ec-07_006540]]
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−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-18_003270]]
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−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[P562-PWY]], myo-inositol degradation I: [http://metacyc.org/META/NEW-IMAGE?object=P562-PWY P562-PWY]
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7241]], myo-inositol degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7241 PWY-7241]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7237]], myo-, chiro- and scillo-inositol degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7237 PWY-7237]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5940]], streptomycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5940 PWY-5940]
 
−
** '''2''' reactions found over '''18''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16949 16949]
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{{#set: common name=Mitochondrial intermediate peptidase (N-terminal)}}
−
* LIGAND-RXN:
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{{#set: ec number=EC-3.4.24.59}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01183 R01183]
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{{#set: gene associated=Ec-28_002150}}
−
* UNIPROT:
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{{#set: in pathway=}}
−
** [http://www.uniprot.org/uniprot/P26935 P26935]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=oxidoreductase, NAD-binding, myo-inositol 2-dehydrogenase}}
+
−
{{#set: common name=Inositol 2-dehydrogenase}}
+
−
{{#set: common name=Oxidoreductase, C-terminal}}
+
−
{{#set: ec number=EC-1.1.1.18}}
+
−
{{#set: gene associated=Ec-01_006070|Ec-07_006540|Ec-18_003270}}
+
−
{{#set: in pathway=P562-PWY|PWY-7241|PWY-7237|PWY-5940}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:43, 21 March 2018

Reaction 3.4.24.59-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Mitochondrial intermediate peptidase (N-terminal)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=C4&oldid=20995"