Difference between revisions of "Ec-10 004380"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN] == * direction: ** LEF...")
(Created page with "Category:Gene == Gene Ec-02_005910 == * left end position: ** 6079457 * transcription direction: ** POSITIVE * right end position: ** 6088957 * centisome position: ** 93.1...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN RXN-MG-PROTOPORPHYRIN-METHYLESTER-SYN] ==
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== Gene Ec-02_005910 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 6079457
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* common name:
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* transcription direction:
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** magnesium protoporphyrin IX methyltransferase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/2.1.1.11 EC-2.1.1.11]
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** 6088957
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* centisome position:
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** 93.13192   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0082_0071
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** Esi0082_0071
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[AMIDASE-RXN]]
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** 1 [[MG-PROTOPORPHYRIN]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[MG-PROTOPORPHYRIN-MONOMETHYL-ESTER]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 Mg-protoporphyrin[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 magnesium-protoporphyrin IX 13-monomethyl ester[c]
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* Reaction: [[GUANIDINOBUTANAMIDE-NH3-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[PYRAZIN-RXN]]
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* [[Ec-01_007810]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: automated-name-match
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***GO-TERM
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* Reaction: [[R311-RXN]]
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== Pathways  ==
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-5531]], 3,8-divinyl-chlorophyllide a biosynthesis II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5531 PWY-5531]
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*** Assignment: automated-name-match
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** '''4''' reactions found over '''9''' reactions in the full pathway
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* Reaction: [[RXN-14727]]
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* [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN]
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** Source: [[annotation-esiliculosus_genome]]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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*** Assignment: automated-name-match
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* [[PWY-7159]], 3,8-divinyl-chlorophyllide a biosynthesis III (aerobic, light independent): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7159 PWY-7159]
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* Reaction: [[RXN-14728]]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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** Source: [[annotation-esiliculosus_genome]]
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== Reconstruction information  ==
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*** Assignment: automated-name-match
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* Category: [[annotation]]
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* Reaction: [[RXN-17608]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: automated-name-match
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* Reaction: [[RXNN-404]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-581]]
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* [[PWY-5025]]
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* [[PWY-3161]]
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* [[ARGDEG-V-PWY]]
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* [[PWY-7308]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=6079457}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17809 17809]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=6088957}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04237 R04237]
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{{#set: centisome position=93.13192    }}
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* UNIPROT:
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{{#set: common name=Esi_0082_0071|Esi0082_0071}}
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** [http://www.uniprot.org/uniprot/P26162 P26162]
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{{#set: reaction associated=AMIDASE-RXN|GUANIDINOBUTANAMIDE-NH3-RXN|PYRAZIN-RXN|R311-RXN|RXN-14727|RXN-14728|RXN-17608|RXNN-404}}
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** [http://www.uniprot.org/uniprot/Q9RFD7 Q9RFD7]
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{{#set: pathway associated=PWY-581|PWY-5025|PWY-3161|ARGDEG-V-PWY|PWY-7308}}
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** [http://www.uniprot.org/uniprot/Q9RFD5 Q9RFD5]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=magnesium protoporphyrin IX methyltransferase}}
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{{#set: ec number=EC-2.1.1.11}}
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{{#set: gene associated=Ec-01_007810}}
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{{#set: in pathway=PWY-5531|CHLOROPHYLL-SYN|PWY-7159}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:43, 21 March 2018

Gene Ec-02_005910

  • left end position:
    • 6079457
  • transcription direction:
    • POSITIVE
  • right end position:
    • 6088957
  • centisome position:
    • 93.13192
  • Synonym(s):
    • Esi_0082_0071
    • Esi0082_0071

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-10_004380&oldid=21040"