Difference between revisions of "Ec-05 000950"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.151-RXN 2.4.1.151-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** galactosyltransfera...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7616 CPD-7616] == * smiles: ** C(C1(C=C(C(=CC=1)O)O))=O * inchi key: ** InChIKey=IBGBGRVKPA...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.151-RXN 2.4.1.151-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7616 CPD-7616] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** C(C1(C=C(C(=CC=1)O)O))=O
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* inchi key:
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** InChIKey=IBGBGRVKPALMCQ-UHFFFAOYSA-N
 
* common name:
 
* common name:
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** galactosyltransferase
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** protocatechualdehyde
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/2.4.1.87 EC-2.4.1.87]
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** 138.123   
 
* Synonym(s):
 
* Synonym(s):
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** 3,4-dihydroxybenzaldehyde
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** 3,4-dihydroxybenzyl aldehyde
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** rancinamycin IV
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[B-Gal-14-NacGlc-R]][c] '''+''' 1 [[CPD-14553]][c] '''=>''' 1 [[ALPHA-D-GALACTOSYL-ETCETERA-GLUCOSAMINYL]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
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* [[RXN-8872]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 β-D-galactosyl-(1→4)-N-acetyl-β-D-glucosaminyl-R[c] '''+''' 1 UDP-α-D-galactose[c] '''=>''' 1 α-D-galactosyl-(1,3)-β-D-galactosyl-(1,4)-N-acetyl-D-glucosaminyl-R[c] '''+''' 1 H+[c] '''+''' 1 UDP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-01_006680]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-14_005280]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-00_004510]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-24_000030]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-08_004370]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-03_002280]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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* [[Ec-26_000190]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways  ==
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* [[PWY-7434]], terminal O-glycans residues modification: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7434 PWY-7434]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[esiliculosus_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13013 13013]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=8768 8768]
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* LIGAND-RXN:
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* CHEMSPIDER:
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** [http://www.genome.jp/dbget-bin/www_bget?R02791 R02791]
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** [http://www.chemspider.com/Chemical-Structure.8438.html 8438]
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* UNIPROT:
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* CHEBI:
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** [http://www.uniprot.org/uniprot/Q28855 Q28855]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=50205 50205]
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: common name=galactosyltransferase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C16700 C16700]
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{{#set: ec number=EC-2.4.1.87}}
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* HMDB : HMDB59965
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{{#set: gene associated=Ec-01_006680|Ec-14_005280|Ec-00_004510|Ec-24_000030|Ec-08_004370|Ec-03_002280|Ec-26_000190}}
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{{#set: smiles=C(C1(C=C(C(=CC=1)O)O))=O}}
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{{#set: in pathway=PWY-7434}}
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{{#set: inchi key=InChIKey=IBGBGRVKPALMCQ-UHFFFAOYSA-N}}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=protocatechualdehyde}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: molecular weight=138.123    }}
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{{#set: reconstruction source=esiliculosus_genome}}
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{{#set: common name=3,4-dihydroxybenzaldehyde|3,4-dihydroxybenzyl aldehyde|rancinamycin IV}}
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{{#set: produced by=RXN-8872}}

Revision as of 20:41, 17 March 2018

Metabolite CPD-7616

  • smiles:
    • C(C1(C=C(C(=CC=1)O)O))=O
  • inchi key:
    • InChIKey=IBGBGRVKPALMCQ-UHFFFAOYSA-N
  • common name:
    • protocatechualdehyde
  • molecular weight:
    • 138.123
  • Synonym(s):
    • 3,4-dihydroxybenzaldehyde
    • 3,4-dihydroxybenzyl aldehyde
    • rancinamycin IV

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links




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