Difference between revisions of "PORPHOBILSYNTH-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12002 RXN-12002] == * direction: ** LEFT-TO-RIGHT * common name: ** Adenylate kinase/UMP-CMP ki...")
(Created page with "Category:Gene == Gene Ec-20_002530 == * left end position: ** 2563602 * transcription direction: ** NEGATIVE * right end position: ** 2570128 * centisome position: ** 49.7...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12002 RXN-12002] ==
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== Gene Ec-20_002530 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 2563602
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* common name:
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* transcription direction:
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** Adenylate kinase/UMP-CMP kinase
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** NEGATIVE
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** Aspartate/glutamate/uridylate kinase
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* right end position:
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** aspartate/glutamate/uridylate kinase
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** 2570128
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** cytidylate kinase
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* centisome position:
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* ec number:
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** 49.716694   
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** [http://enzyme.expasy.org/EC/2.7.4.22 EC-2.7.4.22]
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** [http://enzyme.expasy.org/EC/2.7.4.14 EC-2.7.4.14]
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* Synonym(s):
 
* Synonym(s):
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** Esi_0198_0009
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** Esi0198_0009
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2.4.1.46-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[UMP]][c] '''=>''' 1 [[UDP]][c] '''+''' 1 [[ADP]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 ATP[c] '''+''' 1 UMP[c] '''=>''' 1 UDP[c] '''+''' 1 ADP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-16_005090]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-24_000610]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-06_003080]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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** [[pantograph]]-[[aragem]]
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* [[Ec-14_004920]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-27_003730]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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* [[Ec-07_003680]]
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** ESILICULOSUS_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-7176]], UTP and CTP de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7176 PWY-7176]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
 
** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Reaction: [[RXN-16027]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-401]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2563602}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24400 24400]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2570128}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00158 R00158]
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{{#set: centisome position=49.716694    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0198_0009|Esi0198_0009}}
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{{#set: common name=Adenylate kinase/UMP-CMP kinase}}
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{{#set: reaction associated=2.4.1.46-RXN|RXN-16027}}
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{{#set: common name=Aspartate/glutamate/uridylate kinase}}
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{{#set: pathway associated=PWY-401}}
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{{#set: common name=aspartate/glutamate/uridylate kinase}}
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{{#set: common name=cytidylate kinase}}
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{{#set: ec number=EC-2.7.4.22}}
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{{#set: ec number=EC-2.7.4.14}}
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{{#set: gene associated=Ec-16_005090|Ec-24_000610|Ec-06_003080|Ec-14_004920|Ec-27_003730|Ec-07_003680}}
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{{#set: in pathway=PWY-7176}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 13:44, 21 March 2018

Gene Ec-20_002530

  • left end position:
    • 2563602
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 2570128
  • centisome position:
    • 49.716694
  • Synonym(s):
    • Esi_0198_0009
    • Esi0198_0009

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PORPHOBILSYNTH-RXN&oldid=21137"