Difference between revisions of "Ec-10 005740"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.1.1.24-RXN 6.1.1.24-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Ribosomal protein L25...")
(Created page with "Category:Gene == Gene Ec-16_000240 == * left end position: ** 225366 * transcription direction: ** NEGATIVE * right end position: ** 234541 * centisome position: ** 4.2221...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.1.1.24-RXN 6.1.1.24-RXN] ==
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== Gene Ec-16_000240 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 225366
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* common name:
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* transcription direction:
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** Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain
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** NEGATIVE
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** Glutamyl-tRNA Synthetase, chloroplast precursor
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* right end position:
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* ec number:
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** 234541
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** [http://enzyme.expasy.org/EC/6.1.1.24 EC-6.1.1.24]
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* centisome position:
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** 4.222192   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0095_0043
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** Esi0095_0043
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PEROXID-RXN]]
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** 1 [[GLX-tRNAs]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[GLUTAMYL-GLX-TRNAS]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 a tRNAGlx[c] '''+''' 1 ATP[c] '''+''' 1 L-glutamate[c] '''+''' 1 H+[c] '''=>''' 1 an L-glutamyl-[tRNAGlx][c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
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* Reaction: [[RXN-14240]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: go-term
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-15288]]
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* [[Ec-06_008480]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: go-term
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***EC-NUMBER
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* Reaction: [[RXN-17352]]
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* [[Ec-15_002360]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: go-term
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***EC-NUMBER
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* Reaction: [[RXN-8635]]
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-7214]]
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* [[PWY-6824]]
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* [[PWY-7445]]
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* [[PWY-5469]]
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* [[PWY-5466]]
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* [[PWY-5461]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=225366}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18397 18397]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=234541}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03651 R03651]
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{{#set: centisome position=4.222192    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Esi_0095_0043|Esi0095_0043}}
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{{#set: common name=Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain}}
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{{#set: reaction associated=PEROXID-RXN|RXN-14240|RXN-15288|RXN-17352|RXN-8635}}
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{{#set: common name=Glutamyl-tRNA Synthetase, chloroplast precursor}}
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{{#set: pathway associated=PWY-7214|PWY-6824|PWY-7445|PWY-5469|PWY-5466|PWY-5461}}
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{{#set: ec number=EC-6.1.1.24}}
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{{#set: gene associated=Ec-06_008480|Ec-15_002360}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:46, 21 March 2018

Gene Ec-16_000240

  • left end position:
    • 225366
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 234541
  • centisome position:
    • 4.222192
  • Synonym(s):
    • Esi_0095_0043
    • Esi0095_0043

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-10_005740&oldid=21513"