Difference between revisions of "RXN0-5398"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=INOSITOL-1-4-BISPHOSPHATE INOSITOL-1-4-BISPHOSPHATE] == * smiles: ** C1(O)(C(O)C(OP(=O)([O-])[O...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENYL-KIN-RXN ADENYL-KIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Adenylate kinase...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=INOSITOL-1-4-BISPHOSPHATE INOSITOL-1-4-BISPHOSPHATE] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENYL-KIN-RXN ADENYL-KIN-RXN] ==
−
* smiles:
+
* direction:
−
** C1(O)(C(O)C(OP(=O)([O-])[O-])C(O)C(O)C(OP([O-])([O-])=O)1)
+
** LEFT-TO-RIGHT
−
* inchi key:
+
−
** InChIKey=PELZSPZCXGTUMR-RTPHHQFDSA-J
+
 
* common name:
 
* common name:
−
** D-myo-inositol (1,4)-bisphosphate
+
** Adenylate kinase family protein
−
* molecular weight:
+
** adenylate kinase
−
** 336.085   
+
** Adenylate kinase/UMP-CMP kinase
 +
** UMP-CMP kinase
 +
** Alpha-D-phosphohexomutase, C-terminal
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.7.4.3 EC-2.7.4.3]
 
* Synonym(s):
 
* Synonym(s):
−
** Ins(1,4)P2
 
−
** myo-inositol (1,4)-bisphosphate
 
−
** inositol (1,4)-bisphosphate
 
−
** I(1,4)P2
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[3.1.3.57-RXN]]
+
* With identifiers:
−
== Reaction(s) known to produce the compound ==
+
** 1 [[ATP]][c] '''+''' 1 [[AMP]][c] '''=>''' 2 [[ADP]][c]
−
* [[RXN-13334]]
+
* With common name(s):
−
* [[3.1.3.56-RXN]]
+
** 1 ATP[c] '''+''' 1 AMP[c] '''=>''' 2 ADP[c]
−
== Reaction(s) of unknown directionality ==
+
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Ec-12_005110]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-16_004100]]
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-07_003680]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-00_009240]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[Ec-01_006380]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-aragem]]
 +
* Gene: [[Ec-14_004920]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-15_000120]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-06_003080]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-16_005090]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
* [[PWY-7219]], adenosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7219 PWY-7219]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-aragem]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* CAS : 47055-78-7
+
* RHEA:
−
* PUBCHEM:
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12973 12973]
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25203530 25203530]
+
* LIGAND-RXN:
−
* HMDB : HMDB00968
+
** [http://www.genome.jp/dbget-bin/www_bget?R00127 R00127]
−
* LIGAND-CPD:
+
* UNIPROT:
−
** [http://www.genome.jp/dbget-bin/www_bget?C01220 C01220]
+
** [http://www.uniprot.org/uniprot/P05081 P05081]
−
* CHEBI:
+
** [http://www.uniprot.org/uniprot/P20425 P20425]
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58282 58282]
+
** [http://www.uniprot.org/uniprot/P08166 P08166]
−
* METABOLIGHTS : MTBLC58282
+
** [http://www.uniprot.org/uniprot/P38372 P38372]
−
{{#set: smiles=C1(O)(C(O)C(OP(=O)([O-])[O-])C(O)C(O)C(OP([O-])([O-])=O)1)}}
+
** [http://www.uniprot.org/uniprot/O27699 O27699]
−
{{#set: inchi key=InChIKey=PELZSPZCXGTUMR-RTPHHQFDSA-J}}
+
** [http://www.uniprot.org/uniprot/O29581 O29581]
−
{{#set: common name=D-myo-inositol (1,4)-bisphosphate}}
+
** [http://www.uniprot.org/uniprot/O59443 O59443]
−
{{#set: molecular weight=336.085    }}
+
** [http://www.uniprot.org/uniprot/Q9YDD2 Q9YDD2]
−
{{#set: common name=Ins(1,4)P2|myo-inositol (1,4)-bisphosphate|inositol (1,4)-bisphosphate|I(1,4)P2}}
+
** [http://www.uniprot.org/uniprot/Q9UZN1 Q9UZN1]
−
{{#set: consumed by=3.1.3.57-RXN}}
+
** [http://www.uniprot.org/uniprot/P58117 P58117]
−
{{#set: produced by=RXN-13334|3.1.3.56-RXN}}
+
** [http://www.uniprot.org/uniprot/Q9PHM8 Q9PHM8]
 +
** [http://www.uniprot.org/uniprot/P54819 P54819]
 +
** [http://www.uniprot.org/uniprot/O66490 O66490]
 +
** [http://www.uniprot.org/uniprot/Q9V1V9 Q9V1V9]
 +
** [http://www.uniprot.org/uniprot/P49973 P49973]
 +
** [http://www.uniprot.org/uniprot/P24323 P24323]
 +
** [http://www.uniprot.org/uniprot/P47417 P47417]
 +
** [http://www.uniprot.org/uniprot/Q9HPA7 Q9HPA7]
 +
** [http://www.uniprot.org/uniprot/P29410 P29410]
 +
** [http://www.uniprot.org/uniprot/P16304 P16304]
 +
** [http://www.uniprot.org/uniprot/P00570 P00570]
 +
** [http://www.uniprot.org/uniprot/P27142 P27142]
 +
** [http://www.uniprot.org/uniprot/P07170 P07170]
 +
** [http://www.uniprot.org/uniprot/P12115 P12115]
 +
** [http://www.uniprot.org/uniprot/P69441 P69441]
 +
** [http://www.uniprot.org/uniprot/P00568 P00568]
 +
** [http://www.uniprot.org/uniprot/P10772 P10772]
 +
** [http://www.uniprot.org/uniprot/P00571 P00571]
 +
** [http://www.uniprot.org/uniprot/P00569 P00569]
 +
** [http://www.uniprot.org/uniprot/P10251 P10251]
 +
** [http://www.uniprot.org/uniprot/P43417 P43417]
 +
** [http://www.uniprot.org/uniprot/P49974 P49974]
 +
** [http://www.uniprot.org/uniprot/P33107 P33107]
 +
** [http://www.uniprot.org/uniprot/P27143 P27143]
 +
** [http://www.uniprot.org/uniprot/P26364 P26364]
 +
** [http://www.uniprot.org/uniprot/P33075 P33075]
 +
** [http://www.uniprot.org/uniprot/P35140 P35140]
 +
** [http://www.uniprot.org/uniprot/P35141 P35141]
 +
** [http://www.uniprot.org/uniprot/P39068 P39068]
 +
** [http://www.uniprot.org/uniprot/P34346 P34346]
 +
** [http://www.uniprot.org/uniprot/P43188 P43188]
 +
** [http://www.uniprot.org/uniprot/P69344 P69344]
 +
** [http://www.uniprot.org/uniprot/P0A0U6 P0A0U6]
 +
** [http://www.uniprot.org/uniprot/P49979 P49979]
 +
** [http://www.uniprot.org/uniprot/Q50299 Q50299]
 +
** [http://www.uniprot.org/uniprot/P43412 P43412]
 +
** [http://www.uniprot.org/uniprot/P72641 P72641]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=Adenylate kinase family protein}}
 +
{{#set: common name=adenylate kinase}}
 +
{{#set: common name=Adenylate kinase/UMP-CMP kinase}}
 +
{{#set: common name=UMP-CMP kinase}}
 +
{{#set: common name=Alpha-D-phosphohexomutase, C-terminal}}
 +
{{#set: ec number=EC-2.7.4.3}}
 +
{{#set: gene associated=Ec-12_005110|Ec-16_004100|Ec-07_003680|Ec-00_009240|Ec-01_006380|Ec-14_004920|Ec-15_000120|Ec-06_003080|Ec-16_005090}}
 +
{{#set: in pathway=PWY-7219}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 13:47, 21 March 2018

Reaction ADENYL-KIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Adenylate kinase family protein
    • adenylate kinase
    • Adenylate kinase/UMP-CMP kinase
    • UMP-CMP kinase
    • Alpha-D-phosphohexomutase, C-terminal
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 AMP[c] => 2 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7219, adenosine ribonucleotides de novo biosynthesis: PWY-7219
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN0-5398&oldid=21568"