Difference between revisions of "Phosphoserines"

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(Created page with "Category:Gene == Gene Ec-04_005690 == * left end position: ** 5639559 * transcription direction: ** POSITIVE * right end position: ** 5653271 * centisome position: ** 86.6...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SERINE--TRNA-LIGASE-RXN SERINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: **...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-04_005690 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SERINE--TRNA-LIGASE-RXN SERINE--TRNA-LIGASE-RXN] ==
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* left end position:
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* direction:
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** 5639559
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** Seryl-tRNA synthetase
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* right end position:
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** serine-tRNA ligase
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** 5653271
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/6.1.1.11 EC-6.1.1.11]
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** 86.604546   
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* Synonym(s):
 
* Synonym(s):
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** Esi_0140_0074
 
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** Esi0140_0074
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[ATPASE-RXN]]
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* With identifiers:
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** esiliculosus_genome
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** 1 [[SER-tRNAs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[SER]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-SER-tRNAs]][c] '''+''' 1 [[PPI]][c]
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***go-term
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* With common name(s):
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== Pathways associated ==
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** 1 a tRNAser[c] '''+''' 1 H+[c] '''+''' 1 ATP[c] '''+''' 1 L-serine[c] '''=>''' 1 AMP[c] '''+''' 1 an L-seryl-[tRNAser][c] '''+''' 1 diphosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-24_004300]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-08_002360]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: GO-TERM
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== Pathways ==
 +
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
 +
== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=5639559}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12292 12292]
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{{#set: right end position=5653271}}
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* LIGAND-RXN:
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{{#set: centisome position=86.604546    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R03662 R03662]
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{{#set: common name=Esi_0140_0074|Esi0140_0074}}
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* UNIPROT:
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{{#set: reaction associated=ATPASE-RXN}}
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** [http://www.uniprot.org/uniprot/Q9ZCG5 Q9ZCG5]
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** [http://www.uniprot.org/uniprot/O51244 O51244]
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** [http://www.uniprot.org/uniprot/O66647 O66647]
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** [http://www.uniprot.org/uniprot/Q9PIB3 Q9PIB3]
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** [http://www.uniprot.org/uniprot/Q58477 Q58477]
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** [http://www.uniprot.org/uniprot/O27194 O27194]
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** [http://www.uniprot.org/uniprot/O84734 O84734]
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** [http://www.uniprot.org/uniprot/Q9X199 Q9X199]
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** [http://www.uniprot.org/uniprot/P47251 P47251]
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** [http://www.uniprot.org/uniprot/Q9JT77 Q9JT77]
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** [http://www.uniprot.org/uniprot/O83653 O83653]
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** [http://www.uniprot.org/uniprot/Q9Z736 Q9Z736]
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** [http://www.uniprot.org/uniprot/P49591 P49591]
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** [http://www.uniprot.org/uniprot/P56458 P56458]
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** [http://www.uniprot.org/uniprot/Q9ZJD9 Q9ZJD9]
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** [http://www.uniprot.org/uniprot/Q9CEX2 Q9CEX2]
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** [http://www.uniprot.org/uniprot/P43833 P43833]
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** [http://www.uniprot.org/uniprot/P26636 P26636]
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** [http://www.uniprot.org/uniprot/P39919 P39919]
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** [http://www.uniprot.org/uniprot/P37464 P37464]
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** [http://www.uniprot.org/uniprot/Q39230 Q39230]
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** [http://www.uniprot.org/uniprot/P75107 P75107]
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** [http://www.uniprot.org/uniprot/P73201 P73201]
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** [http://www.uniprot.org/uniprot/O82108 O82108]
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** [http://www.uniprot.org/uniprot/O82110 O82110]
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** [http://www.uniprot.org/uniprot/O81983 O81983]
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** [http://www.uniprot.org/uniprot/O45887 O45887]
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** [http://www.uniprot.org/uniprot/O14018 O14018]
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** [http://www.uniprot.org/uniprot/P54221 P54221]
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** [http://www.uniprot.org/uniprot/P07284 P07284]
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** [http://www.uniprot.org/uniprot/P0A8L1 P0A8L1]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Seryl-tRNA synthetase}}
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{{#set: common name=serine-tRNA ligase}}
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{{#set: ec number=EC-6.1.1.11}}
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{{#set: gene associated=Ec-24_004300|Ec-08_002360}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:47, 21 March 2018

Reaction SERINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Seryl-tRNA synthetase
    • serine-tRNA ligase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a tRNAser[c] + 1 H+[c] + 1 ATP[c] + 1 L-serine[c] => 1 AMP[c] + 1 an L-seryl-[tRNAser][c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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