Difference between revisions of "Ec-07 007870"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRIBFAICARPISOM-RXN PRIBFAICARPISOM-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 1-(5-ph...")
(Created page with "Category:Gene == Gene Ec-07_006760 == * left end position: ** 6512509 * transcription direction: ** POSITIVE * right end position: ** 6515320 * centisome position: ** 84.3...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRIBFAICARPISOM-RXN PRIBFAICARPISOM-RXN] ==
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== Gene Ec-07_006760 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 6512509
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* common name:
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* transcription direction:
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** 1-(5-phosphoribosyl)-5- ((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/5.3.1.16 EC-5.3.1.16]
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** 6515320
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* centisome position:
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** 84.33238   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0110_0095
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** Esi0110_0095
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** COX6a
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[CYTOCHROME-C-OXIDASE-RXN]]
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** 1 [[PHOSPHORIBOSYL-FORMIMINO-AICAR-P]][c] '''=>''' 1 [[PHOSPHORIBULOSYL-FORMIMINO-AICAR-P]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: go-term
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** 1 1-(5-phospho-β-D-ribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide[c] '''=>''' 1 phosphoribulosylformimino-AICAR-P[c]
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* Reaction: [[RXN-15830]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-03_004720]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-6692]]
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* [[PWY-7279]]
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* [[PWY-3781]]
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* [[PWY-4521]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=6512509}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15469 15469]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=6515320}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04640 R04640]
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{{#set: centisome position=84.33238    }}
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* UNIPROT:
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{{#set: common name=Esi_0110_0095|Esi0110_0095|COX6a}}
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** [http://www.uniprot.org/uniprot/Q02131 Q02131]
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{{#set: reaction associated=CYTOCHROME-C-OXIDASE-RXN|RXN-15830}}
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** [http://www.uniprot.org/uniprot/Q9JVH4 Q9JVH4]
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{{#set: pathway associated=PWY-6692|PWY-7279|PWY-3781|PWY-4521}}
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** [http://www.uniprot.org/uniprot/Q9PM74 Q9PM74]
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** [http://www.uniprot.org/uniprot/P44435 P44435]
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** [http://www.uniprot.org/uniprot/P10372 P10372]
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** [http://www.uniprot.org/uniprot/P10371 P10371]
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** [http://www.uniprot.org/uniprot/P16250 P16250]
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** [http://www.uniprot.org/uniprot/P05324 P05324]
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** [http://www.uniprot.org/uniprot/P26720 P26720]
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** [http://www.uniprot.org/uniprot/P50936 P50936]
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** [http://www.uniprot.org/uniprot/P74561 P74561]
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** [http://www.uniprot.org/uniprot/O82782 O82782]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=1-(5-phosphoribosyl)-5- ((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase}}
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{{#set: ec number=EC-5.3.1.16}}
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{{#set: gene associated=Ec-03_004720}}
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{{#set: in pathway=HISTSYN-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 13:48, 21 March 2018

Gene Ec-07_006760

  • left end position:
    • 6512509
  • transcription direction:
    • POSITIVE
  • right end position:
    • 6515320
  • centisome position:
    • 84.33238
  • Synonym(s):
    • Esi_0110_0095
    • Esi0110_0095
    • COX6a

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-07_007870&oldid=21753"