Difference between revisions of "Ec-17 000820"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9951 RXN-9951] == * direction: ** REVERSIBLE * common name: ** isocitrate dehydrogenase (NADP+)...")
(Created page with "Category:Gene == Gene Ec-06_003440 == * left end position: ** 2824049 * transcription direction: ** POSITIVE * right end position: ** 2835426 * centisome position: ** 32.2...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9951 RXN-9951] ==
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== Gene Ec-06_003440 ==
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* direction:
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* left end position:
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** REVERSIBLE
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** 2824049
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* common name:
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* transcription direction:
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** isocitrate dehydrogenase (NADP+)
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** POSITIVE
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* right end position:
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** 2835426
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* centisome position:
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** 32.246254   
 
* Synonym(s):
 
* Synonym(s):
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** oxalosuccinate decarboxylase
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** Esi_0064_0020
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** oxalsuccinic decarboxylase
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** Esi0064_0020
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** isocitrate (NADP) dehydrogenase
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** MSDH
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** isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase
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** NADP-specific isocitrate dehydrogenase
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** NADP-linked isocitrate dehydrogenase
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** NADP isocitric dehydrogenase
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** isocitrate dehydrogenase (NADP-dependent)
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** NADP-dependent isocitric dehydrogenase
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** triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase
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** NADP+-linked isocitrate dehydrogenase
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** IDH (ambiguous)
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** dual-cofactor-specific isocitrate dehydrogenase
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** NADP+-ICDH
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** NADP+-IDH
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** IDP
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** IDP1
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** IDP2
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** IDP3
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.2.1.27-RXN]]
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** 1 [[NADP]][c] '''+''' 1 [[THREO-DS-ISO-CITRATE]][c] '''<=>''' 1 [[NADPH]][c] '''+''' 1 [[OXALO-SUCCINATE]][c] '''+''' 1 [[PROTON]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 NADP+[c] '''+''' 1 D-threo-isocitrate[c] '''<=>''' 1 NADPH[c] '''+''' 1 oxalosuccinate[c] '''+''' 1 H+[c]
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* Reaction: [[RXN-11213]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-2902]]
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* [[Ec-11_003080]]
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** ESILICULOSUS_GENOME
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***GO-TERM
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== Pathways  ==
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-7574]]
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* [[P562-PWY]]
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* [[BETA-ALA-DEGRADATION-I-PWY]]
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* [[PWY-1781]]
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* [[VALDEG-PWY]]
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* [[PWY-5642]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=2824049}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25588 25588]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=2835426}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01899 R01899]
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{{#set: centisome position=32.246254    }}
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{{#set: direction=REVERSIBLE}}
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{{#set: common name=Esi_0064_0020|Esi0064_0020|MSDH}}
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{{#set: common name=isocitrate dehydrogenase (NADP+)}}
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{{#set: reaction associated=1.2.1.27-RXN|RXN-11213|RXN-2902}}
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{{#set: common name=oxalosuccinate decarboxylase|oxalsuccinic decarboxylase|isocitrate (NADP) dehydrogenase|isocitrate (nicotinamide adenine dinucleotide phosphate) dehydrogenase|NADP-specific isocitrate dehydrogenase|NADP-linked isocitrate dehydrogenase|NADP isocitric dehydrogenase|isocitrate dehydrogenase (NADP-dependent)|NADP-dependent isocitric dehydrogenase|triphosphopyridine nucleotide-linked isocitrate dehydrogenase-oxalosuccinate carboxylase|NADP+-linked isocitrate dehydrogenase|IDH (ambiguous)|dual-cofactor-specific isocitrate dehydrogenase|NADP+-ICDH|NADP+-IDH|IDP|IDP1|IDP2|IDP3}}
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{{#set: pathway associated=PWY-7574|P562-PWY|BETA-ALA-DEGRADATION-I-PWY|PWY-1781|VALDEG-PWY|PWY-5642}}
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{{#set: gene associated=Ec-11_003080}}
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−
{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:49, 21 March 2018

Gene Ec-06_003440

  • left end position:
    • 2824049
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2835426
  • centisome position:
    • 32.246254
  • Synonym(s):
    • Esi_0064_0020
    • Esi0064_0020
    • MSDH

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-17_000820&oldid=21939"