Difference between revisions of "Ec-14 001340"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TREHALA-RXN TREHALA-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Six-hairpin glycosidase...")
(Created page with "Category:Gene == Gene Ec-08_005270 == * left end position: ** 4996203 * transcription direction: ** POSITIVE * right end position: ** 5000559 * centisome position: ** 74.6...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TREHALA-RXN TREHALA-RXN] ==
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== Gene Ec-08_005270 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4996203
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* common name:
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* transcription direction:
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** Six-hairpin glycosidase-like
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** POSITIVE
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** Trehalase N-terminal fragment, family GH37
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* right end position:
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* ec number:
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** 5000559
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** [http://enzyme.expasy.org/EC/3.2.1.28 EC-3.2.1.28]
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* centisome position:
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** 74.60287   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0968_0001
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** Esi0968_0001
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** TPP
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[RXN1G-1435]]
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** 1 [[TREHALOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ALPHA-GLUCOSE]][c] '''+''' 1 [[GLC]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 α,α-trehalose[c] '''+''' 1 H2O[c] '''=>''' 1 α-D-glucopyranose[c] '''+''' 1 β-D-glucopyranose[c]
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* Reaction: [[RXN1G-1436]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN1G-1437]]
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* [[Ec-00_010170]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: ec-number
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***EC-NUMBER
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* Reaction: [[RXN1G-1438]]
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* [[Ec-22_000080]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: ec-number
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***EC-NUMBER
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* Reaction: [[RXN1G-1439]]
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== Pathways  ==
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY0-1182]], trehalose degradation II (trehalase): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1182 PWY0-1182]
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*** Assignment: ec-number
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* Reaction: [[TREHALOSEPHOSPHA-RXN]]
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* [[PWY0-1466]], trehalose degradation VI (periplasmic): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1466 PWY0-1466]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[TRESYN-PWY]]
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* [[PWYG-321]]
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* [[PWY-881]]
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* [[TREHALOSESYN-PWY]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=4996203}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00010 R00010]
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{{#set: transcription direction=POSITIVE}}
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* UNIPROT:
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{{#set: right end position=5000559}}
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** [http://www.uniprot.org/uniprot/P19813 P19813]
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{{#set: centisome position=74.60287    }}
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** [http://www.uniprot.org/uniprot/O43280 O43280]
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{{#set: common name=Esi_0968_0001|Esi0968_0001|TPP}}
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** [http://www.uniprot.org/uniprot/P13482 P13482]
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{{#set: reaction associated=RXN1G-1435|RXN1G-1436|RXN1G-1437|RXN1G-1438|RXN1G-1439|TREHALOSEPHOSPHA-RXN}}
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** [http://www.uniprot.org/uniprot/P32359 P32359]
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{{#set: pathway associated=TRESYN-PWY|PWYG-321|PWY-881|TREHALOSESYN-PWY}}
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** [http://www.uniprot.org/uniprot/P32358 P32358]
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** [http://www.uniprot.org/uniprot/P35172 P35172]
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** [http://www.uniprot.org/uniprot/P62601 P62601]
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** [http://www.uniprot.org/uniprot/P32356 P32356]
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** [http://www.uniprot.org/uniprot/P48016 P48016]
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** [http://www.uniprot.org/uniprot/P78922 P78922]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Six-hairpin glycosidase-like}}
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{{#set: common name=Trehalase N-terminal fragment, family GH37}}
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{{#set: ec number=EC-3.2.1.28}}
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{{#set: gene associated=Ec-00_010170|Ec-22_000080}}
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{{#set: in pathway=PWY0-1182|PWY0-1466}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 13:49, 21 March 2018

Gene Ec-08_005270

  • left end position:
    • 4996203
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5000559
  • centisome position:
    • 74.60287
  • Synonym(s):
    • Esi_0968_0001
    • Esi0968_0001
    • TPP

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-14_001340&oldid=21969"