Difference between revisions of "GCVT-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1147 RXN0-1147] == * direction: ** REVERSIBLE * common name: ** dihydrolipoamide dehydrogenase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14205 RXN-14205] == * direction: ** REVERSIBLE * common name: ** Apyrase * ec number: ** [http:...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1147 RXN0-1147] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14205 RXN-14205] ==
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
 
* common name:
 
* common name:
−
** dihydrolipoamide dehydrogenase
+
** Apyrase
−
** 2-oxoglutarate dehydrogenase E1 component
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.61 EC-2.3.1.61]
+
** [http://enzyme.expasy.org/EC/3.6.1.5 EC-3.6.1.5]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[Oxo-glutarate-dehydrogenase-DH-lipoyl]][c] '''+''' 1 [[SUC-COA]][c] '''<=>''' 1 [[CO-A]][c] '''+''' 1 [[Oxo-glutarate-dehydro-suc-DH-lipoyl]][c]
+
** 1 [[CPD0-1905]][c] '''+''' 2 [[WATER]][c] '''<=>''' 1 [[CPD-12365]][c] '''+''' 2 [[PROTON]][c] '''+''' 2 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine[c] '''+''' 1 succinyl-CoA[c] '''<=>''' 1 coenzyme A[c] '''+''' 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-S-succinyldihydrolipoyl-L-lysine[c]
+
** 1 8-oxo-dGTP[c] '''+''' 2 H2O[c] '''<=>''' 1 8-oxo-dGMP[c] '''+''' 2 H+[c] '''+''' 2 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-21_002300]]
+
* Gene: [[Ec-02_001970]]
−
** ESILICULOSUS_GENOME
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** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
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*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Ec-25_000020]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Ec-27_004160]]
+
−
** ESILICULOSUS_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-5084]], 2-oxoglutarate decarboxylation to succinyl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5084 PWY-5084]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01940 R01940]
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02570 R02570]
 
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=dihydrolipoamide dehydrogenase}}
+
{{#set: common name=Apyrase}}
−
{{#set: common name=2-oxoglutarate dehydrogenase E1 component}}
+
{{#set: ec number=EC-3.6.1.5}}
−
{{#set: ec number=EC-2.3.1.61}}
+
{{#set: gene associated=Ec-02_001970}}
−
{{#set: gene associated=Ec-21_002300|Ec-25_000020|Ec-27_004160}}
+
{{#set: in pathway=}}
−
{{#set: in pathway=PWY66-398|PWY-5084}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:50, 21 March 2018

Reaction RXN-14205

  • direction:
    • REVERSIBLE
  • common name:
    • Apyrase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 8-oxo-dGTP[c] + 2 H2O[c] <=> 1 8-oxo-dGMP[c] + 2 H+[c] + 2 phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=GCVT-RXN&oldid=22140"