Difference between revisions of "CPD-7671"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-901 RXN0-901] == * direction: ** REVERSIBLE * common name: ** xanthine dehydrogenase * ec numb...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9652 RXN-9652] == * direction: ** LEFT-TO-RIGHT * common name: ** Thiolase-like, subgroup ** Be...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-901 RXN0-901] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9652 RXN-9652] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** xanthine dehydrogenase
+
** Thiolase-like, subgroup
 +
** Beta-ketoacyl synthase, N-terminal
 +
** beta-ketoacyl synthase, partial
 +
** 3-oxoacyl-[acyl-carrier-protein] synthase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.17.1.4 EC-1.17.1.4]
+
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[XANTHINE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[URATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c]
+
** 1 [[Decanoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[MALONYL-COA]][c] '''=>''' 1 [[3-oxo-dodecanoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 xanthine[c] '''+''' 1 H2O[c] '''+''' 1 NAD+[c] '''<=>''' 1 urate[c] '''+''' 1 H+[c] '''+''' 1 NADH[c]
+
** 1 a decanoyl-[acp][c] '''+''' 1 H+[c] '''+''' 1 malonyl-CoA[c] '''=>''' 1 a 3-oxo-dodecanoyl-[acp][c] '''+''' 1 CO2[c] '''+''' 1 coenzyme A[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-20_000230]]
+
* Gene: [[Ec-27_003480]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[aragem]]
+
* Gene: [[Ec-12_000650]]
−
* [[Ec-20_000210]]
+
** Source: [[annotation-esiliculosus_genome]]
−
** ESILICULOSUS_GENOME
+
*** Assignment: GO-TERM
−
***AUTOMATED-NAME-MATCH
+
* Gene: [[Ec-27_002090]]
−
** [[pantograph]]-[[aragem]]
+
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Ec-12_000640]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6607]], guanosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6607 PWY-6607]
+
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''20''' reactions found over '''31''' reactions in the full pathway
−
* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=SALVADEHYPOX-PWY SALVADEHYPOX-PWY]
+
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
−
* [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY]
+
−
** '''4''' reactions found over '''17''' reactions in the full pathway
+
−
* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
+
−
** '''6''' reactions found over '''8''' reactions in the full pathway
+
−
* [[PWY-5497]], purine nucleobases degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497]
+
−
** '''8''' reactions found over '''24''' reactions in the full pathway
+
−
* [[PWY-6606]], guanosine nucleotides degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6606 PWY-6606]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-6999]], theophylline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6999 PWY-6999]
+
−
** '''2''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-6608]], guanosine nucleotides degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6608 PWY-6608]
+
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-5695]], urate biosynthesis/inosine 5'-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5695 PWY-5695]
+
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-6538]], caffeine degradation III (bacteria, via demethylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6538 PWY-6538]
+
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-aragem]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16669 16669]
+
{{#set: common name=Thiolase-like, subgroup}}
−
* LIGAND-RXN:
+
{{#set: common name=Beta-ketoacyl synthase, N-terminal}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02103 R02103]
+
{{#set: common name=beta-ketoacyl synthase, partial}}
−
* UNIPROT:
+
{{#set: common name=3-oxoacyl-[acyl-carrier-protein] synthase}}
−
** [http://www.uniprot.org/uniprot/Q62637 Q62637]
+
{{#set: ec number=EC-2.3.1.86}}
−
** [http://www.uniprot.org/uniprot/P22811 P22811]
+
{{#set: ec number=EC-2.3.1.85}}
−
** [http://www.uniprot.org/uniprot/Q12553 Q12553]
+
{{#set: ec number=EC-2.3.1.41}}
−
** [http://www.uniprot.org/uniprot/P08793 P08793]
+
{{#set: gene associated=Ec-27_003480|Ec-12_000650|Ec-27_002090|Ec-12_000640}}
−
** [http://www.uniprot.org/uniprot/P10351 P10351]
+
{{#set: in pathway=PWY-5994}}
−
** [http://www.uniprot.org/uniprot/Q7M0I7 Q7M0I7]
+
{{#set: reconstruction category=annotation}}
−
** [http://www.uniprot.org/uniprot/Q7M0I8 Q7M0I8]
+
{{#set: reconstruction source=annotation-esiliculosus_genome}}
−
** [http://www.uniprot.org/uniprot/Q7M0I9 Q7M0I9]
+
{{#set: reconstruction tool=pathwaytools}}
−
** [http://www.uniprot.org/uniprot/P47990 P47990]
+
−
** [http://www.uniprot.org/uniprot/P47989 P47989]
+
−
** [http://www.uniprot.org/uniprot/Q00519 Q00519]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=xanthine dehydrogenase}}
+
−
{{#set: ec number=EC-1.17.1.4}}
+
−
{{#set: gene associated=Ec-20_000230|Ec-20_000210}}
+
−
{{#set: in pathway=PWY-6607|SALVADEHYPOX-PWY|P164-PWY|PWY-6596|PWY-5497|PWY-6606|PWY-6999|PWY-6608|PWY-5695|PWY-6538}}
+
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 13:51, 21 March 2018

Reaction RXN-9652

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Thiolase-like, subgroup
    • Beta-ketoacyl synthase, N-terminal
    • beta-ketoacyl synthase, partial
    • 3-oxoacyl-[acyl-carrier-protein] synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 20 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

"3-oxoacyl-[acyl-carrier-protein] synthase" cannot be used as a page name in this wiki.





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