Difference between revisions of "Ec-03 001280"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALIC-NADP-RXN MALIC-NADP-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Malic oxidoreduct...")
(Created page with "Category:Gene == Gene Ec-01_009540 == * left end position: ** 8094419 * transcription direction: ** POSITIVE * right end position: ** 8094592 * centisome position: ** 78.4...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MALIC-NADP-RXN MALIC-NADP-RXN] ==
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== Gene Ec-01_009540 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 8094419
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* common name:
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* transcription direction:
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** Malic oxidoreductase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.1.1.40 EC-1.1.1.40]
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** 8094592
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* centisome position:
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** 78.44316   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0292_0008
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** Esi0292_0008
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[FORMATETHFLIG-RXN]]
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** 1 [[NADP]][c] '''+''' 1 [[MAL]][c] '''=>''' 1 [[NADPH]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PYRUVATE]][c]
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* With common name(s):
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** 1 NADP+[c] '''+''' 1 (S)-malate[c] '''=>''' 1 NADPH[c] '''+''' 1 CO2[c] '''+''' 1 pyruvate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Ec-01_003680]]
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** ESILICULOSUS_GENOME
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***EC-NUMBER
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** [[pantograph]]-[[aragem]]
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== Pathways  ==
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* [[PWY-241]], C4 photosynthetic carbon assimilation cycle, NADP-ME type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-241 PWY-241]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7117]], C4 photosynthetic carbon assimilation cycle, PEPCK type: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7117 PWY-7117]
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** '''9''' reactions found over '''10''' reactions in the full pathway
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* [[GLUCONEO-PWY]], gluconeogenesis I: [http://metacyc.org/META/NEW-IMAGE?object=GLUCONEO-PWY GLUCONEO-PWY]
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** '''13''' reactions found over '''13''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: go-term
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== Pathways associated ==
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* [[PWY-2201]]
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* [[PWY-1722]]
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* [[PWY-2161]]
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* [[CODH-PWY]]
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* [[PWY-3841]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=8094419}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18253 18253]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=8094592}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00216 R00216]
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{{#set: centisome position=78.44316    }}
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* UNIPROT:
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{{#set: common name=Esi_0292_0008|Esi0292_0008}}
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** [http://www.uniprot.org/uniprot/P12628 P12628]
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{{#set: reaction associated=FORMATETHFLIG-RXN}}
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** [http://www.uniprot.org/uniprot/P06801 P06801]
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{{#set: pathway associated=PWY-2201|PWY-1722|PWY-2161|CODH-PWY|PWY-3841}}
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** [http://www.uniprot.org/uniprot/P13697 P13697]
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** [http://www.uniprot.org/uniprot/P16243 P16243]
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** [http://www.uniprot.org/uniprot/O48656 O48656]
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** [http://www.uniprot.org/uniprot/P22178 P22178]
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** [http://www.uniprot.org/uniprot/P93139 P93139]
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** [http://www.uniprot.org/uniprot/P34105 P34105]
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** [http://www.uniprot.org/uniprot/P28227 P28227]
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** [http://www.uniprot.org/uniprot/P36444 P36444]
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** [http://www.uniprot.org/uniprot/P40927 P40927]
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** [http://www.uniprot.org/uniprot/P37223 P37223]
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** [http://www.uniprot.org/uniprot/P48163 P48163]
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** [http://www.uniprot.org/uniprot/Q16798 Q16798]
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** [http://www.uniprot.org/uniprot/O50015 O50015]
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** [http://www.uniprot.org/uniprot/O04935 O04935]
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** [http://www.uniprot.org/uniprot/O04936 O04936]
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** [http://www.uniprot.org/uniprot/P37222 P37222]
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** [http://www.uniprot.org/uniprot/Q42888 Q42888]
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** [http://www.uniprot.org/uniprot/Q42889 Q42889]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Malic oxidoreductase}}
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{{#set: ec number=EC-1.1.1.40}}
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{{#set: gene associated=Ec-01_003680}}
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{{#set: in pathway=PWY-241|PWY-7117|GLUCONEO-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 13:51, 21 March 2018

Gene Ec-01_009540

  • left end position:
    • 8094419
  • transcription direction:
    • POSITIVE
  • right end position:
    • 8094592
  • centisome position:
    • 78.44316
  • Synonym(s):
    • Esi_0292_0008
    • Esi0292_0008

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=Ec-03_001280&oldid=22223"