Difference between revisions of "CPD-7117"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15684 RXN-15684] == * direction: ** LEFT-TO-RIGHT * common name: ** FAD-dependent 3-benzyl-3,6...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHENYLTHFCYCLOHYDRO-RXN METHENYLTHFCYCLOHYDRO-RXN] == * direction: ** REVERSIBLE * common name: *...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15684 RXN-15684] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=METHENYLTHFCYCLOHYDRO-RXN METHENYLTHFCYCLOHYDRO-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** FAD-dependent 3-benzyl-3,6 -dithio-6-(hydroxymethyl)-diketopiperazine dithiol oxidase
+
** Tetrahydrofolate dehydrogenase/cyclohydrolase
−
** thiol oxidase
+
** Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.8.3.2 EC-1.8.3.2]
+
** [http://enzyme.expasy.org/EC/3.5.4.9 EC-3.5.4.9]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-17049]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[CPD-17050]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[5-10-METHENYL-THF-GLU-N]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[FORMYL-THF-GLU-N]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 oxygen[c] '''+''' 1 3-benzyl-3,6 -dithio-6-(hydroxymethyl)-diketopiperazine[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 3-benzyl-3,6 -disulfide-6-(hydroxymethyl)-diketopiperazine[c]
+
** 1 H2O[c] '''+''' 1 a 5,10-methenyltetrahydrofolate[c] '''<=>''' 1 H+[c] '''+''' 1 an N10-formyl-tetrahydrofolate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Ec-06_005300]]
+
* Gene: [[Ec-14_004070]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Ec-26_005200]]
+
* Gene: [[Ec-15_001370]]
−
** ESILICULOSUS_GENOME
+
** Source: [[annotation-esiliculosus_genome]]
−
***GO-TERM
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* [[Ec-14_006970]]
+
−
** ESILICULOSUS_GENOME
+
−
***GO-TERM
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7533]], gliotoxin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7533 PWY-7533]
+
* [[PWY-1722]], formate assimilation into 5,10-methylenetetrahydrofolate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1722 PWY-1722]
−
** '''3''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[1CMET2-PWY]], N10-formyl-tetrahydrofolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=1CMET2-PWY 1CMET2-PWY]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5030]], L-histidine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5030 PWY-5030]
 +
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY]
 +
** '''4''' reactions found over '''17''' reactions in the full pathway
 +
* [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY]
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5497]], purine nucleobases degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497]
 +
** '''8''' reactions found over '''24''' reactions in the full pathway
 +
* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
 +
** '''12''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-6613]], tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6613 PWY-6613]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* RHEA:
−
{{#set: common name=FAD-dependent 3-benzyl-3,6 -dithio-6-(hydroxymethyl)-diketopiperazine dithiol oxidase}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23700 23700]
−
{{#set: common name=thiol oxidase}}
+
* LIGAND-RXN:
−
{{#set: ec number=EC-1.8.3.2}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01655 R01655]
−
{{#set: gene associated=Ec-06_005300|Ec-26_005200|Ec-14_006970}}
+
* UNIPROT:
−
{{#set: in pathway=PWY-7533}}
+
** [http://www.uniprot.org/uniprot/P09440 P09440]
 +
** [http://www.uniprot.org/uniprot/P07245 P07245]
 +
** [http://www.uniprot.org/uniprot/P11586 P11586]
 +
** [http://www.uniprot.org/uniprot/P18155 P18155]
 +
** [http://www.uniprot.org/uniprot/P44313 P44313]
 +
** [http://www.uniprot.org/uniprot/P47259 P47259]
 +
** [http://www.uniprot.org/uniprot/P13995 P13995]
 +
** [http://www.uniprot.org/uniprot/P54382 P54382]
 +
** [http://www.uniprot.org/uniprot/O67736 O67736]
 +
** [http://www.uniprot.org/uniprot/Q9JWI9 Q9JWI9]
 +
** [http://www.uniprot.org/uniprot/Q9PP68 Q9PP68]
 +
** [http://www.uniprot.org/uniprot/P24186 P24186]
 +
** [http://www.uniprot.org/uniprot/Q04448 Q04448]
 +
** [http://www.uniprot.org/uniprot/Q60006 Q60006]
 +
** [http://www.uniprot.org/uniprot/Q27772 Q27772]
 +
** [http://www.uniprot.org/uniprot/P51696 P51696]
 +
** [http://www.uniprot.org/uniprot/O68031 O68031]
 +
** [http://www.uniprot.org/uniprot/Q9ZTV0 Q9ZTV0]
 +
** [http://www.uniprot.org/uniprot/Q9X7F6 Q9X7F6]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Tetrahydrofolate dehydrogenase/cyclohydrolase}}
 +
{{#set: common name=Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain}}
 +
{{#set: ec number=EC-3.5.4.9}}
 +
{{#set: gene associated=Ec-14_004070|Ec-15_001370}}
 +
{{#set: in pathway=PWY-1722|PWY-3841|1CMET2-PWY|PWY-5030|P164-PWY|CODH-PWY|PWY-5497|PWY-2201|PWY-6613}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Revision as of 14:52, 21 March 2018

Reaction METHENYLTHFCYCLOHYDRO-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Tetrahydrofolate dehydrogenase/cyclohydrolase
    • Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-1722, formate assimilation into 5,10-methylenetetrahydrofolate: PWY-1722
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-3841, folate transformations II: PWY-3841
    • 10 reactions found over 11 reactions in the full pathway
  • 1CMET2-PWY, N10-formyl-tetrahydrofolate biosynthesis: 1CMET2-PWY
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-5030, L-histidine degradation III: PWY-5030
    • 2 reactions found over 6 reactions in the full pathway
  • P164-PWY, purine nucleobases degradation I (anaerobic): P164-PWY
    • 4 reactions found over 17 reactions in the full pathway
  • CODH-PWY, reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): CODH-PWY
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-5497, purine nucleobases degradation II (anaerobic): PWY-5497
    • 8 reactions found over 24 reactions in the full pathway
  • PWY-2201, folate transformations I: PWY-2201
    • 12 reactions found over 12 reactions in the full pathway
  • PWY-6613, tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate: PWY-6613
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





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