Difference between revisions of "RXN-14198"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=BADH-RXN BADH-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/1.2.1...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6953 PWY-6953] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=BADH-RXN BADH-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6953 PWY-6953] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/1.2.1.8 EC-1.2.1.8]
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** dTDP-3-acetamido-α-D-fucos biosynthesis
 
* Synonym(s):
 
* Synonym(s):
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** dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''1''' reactions found over '''5''' reactions in the full pathway
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** 1 [[WATER]][c] '''+''' 1 [[BETAINE_ALDEHYDE]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[BETAINE]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]
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* [[DTDPGLUCDEHYDRAT-RXN]]
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* With common name(s):
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** 2 associated gene(s):
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** 1 H2O[c] '''+''' 1 betaine aldehyde[c] '''+''' 1 NAD+[c] '''<=>''' 1 glycine betaine[c] '''+''' 1 NADH[c] '''+''' 2 H+[c]
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*** [[Ec-27_005770]]
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*** [[Ec-01_007350]]
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== Genes associated with this reaction  ==
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** 2 reconstruction source(s) associated:
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-esiliculosus_genome]]
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* [[Ec-20_003790]]
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*** [[orthology-aragem]]
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** [[pantograph]]-[[aragem]]
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== Reaction(s) not found ==
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== Pathways  ==
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* [http://metacyc.org/META/NEW-IMAGE?object=DTDPGLUCOSEPP-RXN DTDPGLUCOSEPP-RXN]
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* [[BETSYN-PWY]], glycine betaine biosynthesis I (Gram-negative bacteria): [http://metacyc.org/META/NEW-IMAGE?object=BETSYN-PWY BETSYN-PWY]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12806 RXN-12806]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12811 RXN-12811]
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* [[CHOLINE-BETAINE-ANA-PWY]], choline degradation I: [http://metacyc.org/META/NEW-IMAGE?object=CHOLINE-BETAINE-ANA-PWY CHOLINE-BETAINE-ANA-PWY]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12839 RXN-12839]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7494]], choline degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7494 PWY-7494]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY1F-353]], glycine betaine biosynthesis III (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-353 PWY1F-353]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-3722]], glycine betaine biosynthesis II (Gram-positive bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-3722 PWY-3722]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[aragem]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-2}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30070 30070]
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{{#set: common name=dTDP-3-acetamido-&alpha;-D-fucos biosynthesis}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15305 15305]
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{{#set: common name=dTDP-3-acetamido-3,6-dideoxy-&alpha;-D-galactose biosynthesis}}
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* LIGAND-RXN:
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{{#set: reaction found=1}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02565 R02565]
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{{#set: total reaction=5}}
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* UNIPROT:
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{{#set: completion rate=20.0}}
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** [http://www.uniprot.org/uniprot/P17202 P17202]
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** [http://www.uniprot.org/uniprot/P17445 P17445]
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** [http://www.uniprot.org/uniprot/P28237 P28237]
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** [http://www.uniprot.org/uniprot/P42757 P42757]
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** [http://www.uniprot.org/uniprot/Q40024 Q40024]
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** [http://www.uniprot.org/uniprot/O24174 O24174]
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** [http://www.uniprot.org/uniprot/Q43828 Q43828]
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** [http://www.uniprot.org/uniprot/Q43829 Q43829]
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** [http://www.uniprot.org/uniprot/O22477 O22477]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-1.2.1.8}}
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{{#set: gene associated=Ec-20_003790}}
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{{#set: in pathway=BETSYN-PWY|CHOLINE-BETAINE-ANA-PWY|PWY-7494|PWY1F-353|PWY-3722}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=aragem}}
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Revision as of 20:43, 17 March 2018

Pathway PWY-6953

  • taxonomic range:
  • common name:
    • dTDP-3-acetamido-α-D-fucos biosynthesis
  • Synonym(s):
    • dTDP-3-acetamido-3,6-dideoxy-α-D-galactose biosynthesis

Reaction(s) found

1 reactions found over 5 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-14198&oldid=10097"