Difference between revisions of "RXN-14390"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTPRATPHYD-RXN HISTPRATPHYD-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphoribosy...")
(Created page with "Category:Gene == Gene Ec-05_003380 == * left end position: ** 5201035 * transcription direction: ** NEGATIVE * right end position: ** 5210090 * centisome position: ** 57.1...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTPRATPHYD-RXN HISTPRATPHYD-RXN] ==
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== Gene Ec-05_003380 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 5201035
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* common name:
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* transcription direction:
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** phosphoribosyl-ATP diphosphatase
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/3.6.1.31 EC-3.6.1.31]
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** 5210090
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* centisome position:
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** 57.132233   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0043_0035
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** Esi0043_0035
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** CAT
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[CATAL-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[PHOSPHORIBOSYL-ATP]][c] '''=>''' 1 [[PHOSPHORIBOSYL-AMP]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[PPI]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H2O[c] '''+''' 1 1-(5-phospho-β-D-ribosyl)-ATP[c] '''=>''' 1 1-(5-phospho-β-D-ribosyl)-AMP[c] '''+''' 2 H+[c] '''+''' 1 diphosphate[c]
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* Reaction: [[PEROXID-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: go-term
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-14189]]
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* [[Ec-19_001690]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: ec-number
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***GO-TERM
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* Reaction: [[RXN-14240]]
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** [[pantograph]]-[[aragem]]
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** Source: [[annotation-esiliculosus_genome]]
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== Pathways  ==
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*** Assignment: go-term
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* [[HISTSYN-PWY]], L-histidine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=HISTSYN-PWY HISTSYN-PWY]
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* Reaction: [[RXN-15288]]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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** Source: [[annotation-esiliculosus_genome]]
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== Reconstruction information  ==
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*** Assignment: go-term
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* Category: [[orthology]]
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* Reaction: [[RXN-17352]]
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** Source: [[orthology-aragem]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pantograph]]
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*** Assignment: go-term
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* Category: [[annotation]]
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* Reaction: [[RXN-8635]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: go-term
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* Reaction: [[RXN66-1]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7214]]
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* [[PWY-6824]]
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* [[PWY66-162]]
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* [[DETOX1-PWY]]
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* [[PWY-7445]]
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* [[DETOX1-PWY-1]]
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* [[PWY-5469]]
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* [[PWY-5506]]
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* [[PWY-5466]]
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* [[PWY-5461]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=5201035}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22828 22828]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5210090}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04035 R04035]
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{{#set: centisome position=57.132233    }}
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* UNIPROT:
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{{#set: common name=Esi_0043_0035|Esi0043_0035|CAT}}
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** [http://www.uniprot.org/uniprot/P44434 P44434]
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{{#set: reaction associated=CATAL-RXN|PEROXID-RXN|RXN-14189|RXN-14240|RXN-15288|RXN-17352|RXN-8635|RXN66-1}}
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** [http://www.uniprot.org/uniprot/Q9X0C5 Q9X0C5]
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{{#set: pathway associated=PWY-7214|PWY-6824|PWY66-162|DETOX1-PWY|PWY-7445|DETOX1-PWY-1|PWY-5469|PWY-5506|PWY-5466|PWY-5461}}
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** [http://www.uniprot.org/uniprot/Q9PM71 Q9PM71]
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** [http://www.uniprot.org/uniprot/Q02130 Q02130]
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** [http://www.uniprot.org/uniprot/Q9RWD6 Q9RWD6]
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** [http://www.uniprot.org/uniprot/Q9K0J4 Q9K0J4]
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** [http://www.uniprot.org/uniprot/O34912 O34912]
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** [http://www.uniprot.org/uniprot/P0A5B1 P0A5B1]
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** [http://www.uniprot.org/uniprot/Q9KSW7 Q9KSW7]
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** [http://www.uniprot.org/uniprot/Q9HUB6 Q9HUB6]
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** [http://www.uniprot.org/uniprot/Q57750 Q57750]
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** [http://www.uniprot.org/uniprot/O27344 O27344]
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** [http://www.uniprot.org/uniprot/Q9JVJ9 Q9JVJ9]
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** [http://www.uniprot.org/uniprot/O67780 O67780]
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** [http://www.uniprot.org/uniprot/Q9PBD1 Q9PBD1]
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** [http://www.uniprot.org/uniprot/P26722 P26722]
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** [http://www.uniprot.org/uniprot/P45353 P45353]
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** [http://www.uniprot.org/uniprot/Q12670 Q12670]
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** [http://www.uniprot.org/uniprot/P50935 P50935]
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** [http://www.uniprot.org/uniprot/P00815 P00815]
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** [http://www.uniprot.org/uniprot/P07685 P07685]
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** [http://www.uniprot.org/uniprot/O59667 O59667]
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** [http://www.uniprot.org/uniprot/O82768 O82768]
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** [http://www.uniprot.org/uniprot/P10367 P10367]
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** [http://www.uniprot.org/uniprot/P06989 P06989]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=phosphoribosyl-ATP diphosphatase}}
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{{#set: ec number=EC-3.6.1.31}}
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{{#set: gene associated=Ec-19_001690}}
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{{#set: in pathway=HISTSYN-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 13:54, 21 March 2018

Gene Ec-05_003380

  • left end position:
    • 5201035
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 5210090
  • centisome position:
    • 57.132233
  • Synonym(s):
    • Esi_0043_0035
    • Esi0043_0035
    • CAT

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN-14390&oldid=22621"