Difference between revisions of "RXN66-480"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN] == * direction: ** L...")
(Created page with "Category:Gene == Gene Ec-16_003560 == * left end position: ** 3683275 * transcription direction: ** NEGATIVE * right end position: ** 3690548 * centisome position: ** 69.0...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN] ==
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== Gene Ec-16_003560 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 3683275
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* common name:
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* transcription direction:
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** NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain
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** NEGATIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/1.1.1.31 EC-1.1.1.31]
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** 3690548
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* centisome position:
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** 69.0055   
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0030_0175
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** Esi0030_0175
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ENOYL-COA-HYDRAT-RXN]]
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** 1 [[NAD]][c] '''+''' 1 [[CPD-12175]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CH3-MALONATE-S-ALD]][c] '''+''' 1 [[NADH]][c]
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** Source: [[annotation-esiliculosus_genome]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 NAD+[c] '''+''' 1 (S)-3-hydroxy-isobutanoate[c] '''=>''' 1 H+[c] '''+''' 1 (S)-methylmalonate-semialdehyde[c] '''+''' 1 NADH[c]
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* Reaction: [[METHYLACYLYLCOA-HYDROXY-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-10697]]
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* [[Ec-11_000140]]
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** Source: [[annotation-esiliculosus_genome]]
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** ESILICULOSUS_GENOME
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*** Assignment: ec-number
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***EC-NUMBER
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* Reaction: [[RXN-10704]]
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* [[Ec-14_006530]]
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** Source: [[annotation-esiliculosus_genome]]
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** [[pantograph]]-[[aragem]]
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[RXN-10705]]
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* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
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** Source: [[annotation-esiliculosus_genome]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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*** Assignment: ec-number
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== Reconstruction information  ==
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* Reaction: [[RXN-11244]]
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* Category: [[orthology]]
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** Source: [[annotation-esiliculosus_genome]]
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** Source: [[orthology-aragem]]
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*** Assignment: ec-number
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*** Tool: [[pantograph]]
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* Reaction: [[RXN-12567]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-13616]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14266]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14272]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14273]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16135]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16558]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17114]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17475]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17776]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17780]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17785]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-17789]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-2425]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-902]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN0-5393]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[TIGLYLCOA-HYDROXY-RXN]]
 
** Source: [[annotation-esiliculosus_genome]]
 
** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-6435]]
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* [[PWY-7656]]
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* [[PWY-7046]]
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* [[PWY-81]]
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* [[PWY-1361]]
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* [[PWY-735]]
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* [[PWY-7606]]
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* [[PWY-5109]]
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* [[PWY0-321]]
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* [[VALDEG-PWY]]
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* [[PWY-7094]]
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* [[PWY-7654]]
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* [[PWY-5138]]
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* [[PWY66-391]]
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* [[PWY-5136]]
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* [[PWY-6863]]
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* [[PWY-7007]]
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* [[ILEUDEG-PWY]]
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* [[PWY0-1337]]
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* [[FAO-PWY]]
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* [[PWY-7726]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: left end position=3683275}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02047 R02047]
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{{#set: transcription direction=NEGATIVE}}
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* UNIPROT:
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{{#set: right end position=3690548}}
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** [http://www.uniprot.org/uniprot/P29266 P29266]
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{{#set: centisome position=69.0055    }}
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** [http://www.uniprot.org/uniprot/P28811 P28811]
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{{#set: common name=Esi_0030_0175|Esi0030_0175}}
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** [http://www.uniprot.org/uniprot/Q8XAE4 Q8XAE4]
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{{#set: reaction associated=ENOYL-COA-HYDRAT-RXN|METHYLACYLYLCOA-HYDROXY-RXN|RXN-10697|RXN-10704|RXN-10705|RXN-11244|RXN-12567|RXN-13616|RXN-14266|RXN-14272|RXN-14273|RXN-16135|RXN-16558|RXN-17114|RXN-17475|RXN-17776|RXN-17780|RXN-17785|RXN-17789|RXN-2425|RXN-902|RXN0-5393|TIGLYLCOA-HYDROXY-RXN}}
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** [http://www.uniprot.org/uniprot/Q55702 Q55702]
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{{#set: pathway associated=PWY-6435|PWY-7656|PWY-7046|PWY-81|PWY-1361|PWY-735|PWY-7606|PWY-5109|PWY0-321|VALDEG-PWY|PWY-7094|PWY-7654|PWY-5138|PWY66-391|PWY-5136|PWY-6863|PWY-7007|ILEUDEG-PWY|PWY0-1337|FAO-PWY|PWY-7726}}
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** [http://www.uniprot.org/uniprot/Q9XTI0 Q9XTI0]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=NADP-dependent 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain}}
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{{#set: ec number=EC-1.1.1.31}}
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{{#set: gene associated=Ec-11_000140|Ec-14_006530}}
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{{#set: in pathway=VALDEG-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Revision as of 13:54, 21 March 2018

Gene Ec-16_003560

  • left end position:
    • 3683275
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 3690548
  • centisome position:
    • 69.0055
  • Synonym(s):
    • Esi_0030_0175
    • Esi0030_0175

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=RXN66-480&oldid=22682"