Difference between revisions of "Charged-LYS-tRNAs"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17383 CPD-17383] == * smiles: ** CCC=CCC=CCC=CCC=CCC=CCCCCCC=CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIOREDOXIN-REDUCT-NADPH-RXN THIOREDOXIN-REDUCT-NADPH-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17383 CPD-17383] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THIOREDOXIN-REDUCT-NADPH-RXN THIOREDOXIN-REDUCT-NADPH-RXN] ==
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* smiles:
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* direction:
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** CCC=CCC=CCC=CCC=CCC=CCCCCCC=CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=MMZJVINJFSRJOK-CYNJBPNESA-J
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* common name:
 
* common name:
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** (2Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA
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** FAD-dependent pyridine nucleotide-disulphide oxidoreductase
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* molecular weight:
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** Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
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** 1102.034   
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** Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain
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* ec number:
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** [http://enzyme.expasy.org/EC/1.8.1.9 EC-1.8.1.9]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-16131]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[Ox-Thioredoxin]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Red-Thioredoxin]][c] '''+''' 1 [[NADP]][c]
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* [[RXN-16130]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 an oxidized thioredoxin[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 a reduced thioredoxin[c] '''+''' 1 NADP+[c]
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 +
== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-02_005330]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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* Gene: [[Ec-19_001510]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-19_004520]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[THIOREDOX-PWY]], thioredoxin pathway: [http://metacyc.org/META/NEW-IMAGE?object=THIOREDOX-PWY THIOREDOX-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=72551529 72551529]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20345 20345]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=76464 76464]
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** [http://www.genome.jp/dbget-bin/www_bget?R02016 R02016]
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{{#set: smiles=CCC=CCC=CCC=CCC=CCC=CCCCCCC=CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O}}
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* UNIPROT:
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{{#set: inchi key=InChIKey=MMZJVINJFSRJOK-CYNJBPNESA-J}}
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** [http://www.uniprot.org/uniprot/Q05741 Q05741]
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{{#set: common name=(2Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA}}
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** [http://www.uniprot.org/uniprot/P56431 P56431]
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{{#set: molecular weight=1102.034    }}
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** [http://www.uniprot.org/uniprot/O28718 O28718]
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{{#set: consumed by=RXN-16131}}
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** [http://www.uniprot.org/uniprot/P80880 P80880]
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{{#set: produced by=RXN-16130}}
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** [http://www.uniprot.org/uniprot/P43496 P43496]
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** [http://www.uniprot.org/uniprot/P94284 P94284]
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** [http://www.uniprot.org/uniprot/O66790 O66790]
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** [http://www.uniprot.org/uniprot/Q9PIY1 Q9PIY1]
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** [http://www.uniprot.org/uniprot/P47348 P47348]
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** [http://www.uniprot.org/uniprot/Q9CH02 Q9CH02]
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** [http://www.uniprot.org/uniprot/Q7M0Y2 Q7M0Y2]
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** [http://www.uniprot.org/uniprot/O26804 O26804]
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** [http://www.uniprot.org/uniprot/Q9JU23 Q9JU23]
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** [http://www.uniprot.org/uniprot/P43788 P43788]
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** [http://www.uniprot.org/uniprot/Q58931 Q58931]
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** [http://www.uniprot.org/uniprot/Q9CF34 Q9CF34]
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** [http://www.uniprot.org/uniprot/P0A9P4 P0A9P4]
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** [http://www.uniprot.org/uniprot/P23160 P23160]
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** [http://www.uniprot.org/uniprot/P39916 P39916]
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** [http://www.uniprot.org/uniprot/Q39242 Q39242]
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** [http://www.uniprot.org/uniprot/Q39243 Q39243]
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** [http://www.uniprot.org/uniprot/P38816 P38816]
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** [http://www.uniprot.org/uniprot/Q25861 Q25861]
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** [http://www.uniprot.org/uniprot/P29509 P29509]
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** [http://www.uniprot.org/uniprot/P52213 P52213]
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** [http://www.uniprot.org/uniprot/Q16881 Q16881]
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** [http://www.uniprot.org/uniprot/P75531 P75531]
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** [http://www.uniprot.org/uniprot/P74746 P74746]
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** [http://www.uniprot.org/uniprot/P46843 P46843]
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** [http://www.uniprot.org/uniprot/O54535 O54535]
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** [http://www.uniprot.org/uniprot/Q39951 Q39951]
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** [http://www.uniprot.org/uniprot/Q92375 Q92375]
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** [http://www.uniprot.org/uniprot/P52215 P52215]
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** [http://www.uniprot.org/uniprot/P51978 P51978]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=FAD-dependent pyridine nucleotide-disulphide oxidoreductase}}
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{{#set: common name=Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain}}
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{{#set: common name=Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain}}
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{{#set: ec number=EC-1.8.1.9}}
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{{#set: gene associated=Ec-02_005330|Ec-19_001510|Ec-19_004520}}
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{{#set: in pathway=THIOREDOX-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 13:55, 21 March 2018

Reaction THIOREDOXIN-REDUCT-NADPH-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • FAD-dependent pyridine nucleotide-disulphide oxidoreductase
    • Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
    • Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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