Difference between revisions of "PROTEIN-C-TERMINAL-S-FARNESYL-L-CYSTEINE"

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(Created page with "Category:Gene == Gene Ec-16_002060 == * left end position: ** 2257126 * transcription direction: ** POSITIVE * right end position: ** 2271010 * centisome position: ** 42.2...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.2.10-RXN 4.2.2.10-RXN] == * direction: ** REVERSIBLE * common name: ** Pectin lyase fold * ec n...")
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[[Category:Gene]]
+
[[Category:Reaction]]
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== Gene Ec-16_002060 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=4.2.2.10-RXN 4.2.2.10-RXN] ==
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* left end position:
+
* direction:
−
** 2257126
+
** REVERSIBLE
−
* transcription direction:
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* common name:
−
** POSITIVE
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** Pectin lyase fold
−
* right end position:
+
* ec number:
−
** 2271010
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** [http://enzyme.expasy.org/EC/4.2.2.10 EC-4.2.2.10]
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* centisome position:
+
−
** 42.286854   
+
 
* Synonym(s):
 
* Synonym(s):
−
** Esi_0047_0063
 
−
** Esi0047_0063
 
  
−
== Reactions associated ==
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== Reaction Formula ==
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* [[RR-BUTANEDIOL-DEHYDROGENASE-RXN]]
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* With identifiers:
−
** [[pantograph]]-[[aragem]]
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** 1 [[Pectin]][c] '''<=>''' n [[CPD-12980]][c]
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* [[UDPNACETYLMURAMATEDEHYDROG-RXN]]
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* With common name(s):
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** esiliculosus_genome
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** 1 a pectin[c] '''<=>''' n an oligosaccharide with 4-deoxy-6-O-methyl-&alpha;-D-galact-4-enuronate end[c]
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***go-term
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−
== Pathways associated ==
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== Genes associated with this reaction  ==
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* [[PWY3O-246]]
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Genes have been associated with this reaction based on different elements listed below.
−
* [[PWY-6386]]
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* Gene: [[Ec-09_004230]]
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* [[PWY-6387]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[PWY-5951]]
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*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-08_000860]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-09_004260]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-08_000920]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-21_001360]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-21_001490]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-00_010800]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-08_000940]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-13_002330]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-00_006370]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-00_009490]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-13_002640]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-02_001160]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-14_000350]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-25_001080]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-18_004360]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-08_000930]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-14_004740]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-20_003120]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-02_001170]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-23_004040]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-13_002310]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-13_002650]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-04_001770]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-14_000190]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-21_003140]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-00_011490]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-12_000410]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Ec-20_003100]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-esiliculosus_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=2257126}}
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* UNIPROT:
−
{{#set: transcription direction=POSITIVE}}
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** [http://www.uniprot.org/uniprot/Q47512 Q47512]
−
{{#set: right end position=2271010}}
+
** [http://www.uniprot.org/uniprot/Q02726 Q02726]
−
{{#set: centisome position=42.286854    }}
+
** [http://www.uniprot.org/uniprot/P22864 P22864]
−
{{#set: common name=Esi_0047_0063|Esi0047_0063}}
+
** [http://www.uniprot.org/uniprot/P24112 P24112]
−
{{#set: reaction associated=RR-BUTANEDIOL-DEHYDROGENASE-RXN|UDPNACETYLMURAMATEDEHYDROG-RXN}}
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** [http://www.uniprot.org/uniprot/P27027 P27027]
−
{{#set: pathway associated=PWY3O-246|PWY-6386|PWY-6387|PWY-5951}}
+
** [http://www.uniprot.org/uniprot/Q01172 Q01172]
 +
** [http://www.uniprot.org/uniprot/Q12639 Q12639]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=Pectin lyase fold}}
 +
{{#set: ec number=EC-4.2.2.10}}
 +
{{#set: gene associated=Ec-09_004230|Ec-08_000860|Ec-09_004260|Ec-08_000920|Ec-21_001360|Ec-21_001490|Ec-00_010800|Ec-08_000940|Ec-13_002330|Ec-00_006370|Ec-00_009490|Ec-13_002640|Ec-02_001160|Ec-14_000350|Ec-25_001080|Ec-18_004360|Ec-08_000930|Ec-14_004740|Ec-20_003120|Ec-02_001170|Ec-23_004040|Ec-13_002310|Ec-13_002650|Ec-04_001770|Ec-14_000190|Ec-21_003140|Ec-00_011490|Ec-12_000410|Ec-20_003100}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-esiliculosus_genome}}
 +
{{#set: reconstruction tool=pathwaytools}}

Revision as of 13:55, 21 March 2018

Reaction 4.2.2.10-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • Pectin lyase fold
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a pectin[c] <=> n an oligosaccharide with 4-deoxy-6-O-methyl-α-D-galact-4-enuronate end[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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