Difference between revisions of "5.1.1.16-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-884 RXN0-884] == * direction: ** LEFT-TO-RIGHT * common name: ** 4-hydroxy-3-methylbut-2-enyl...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3Z-PHYTOCHROMOBILIN 3Z-PHYTOCHROMOBILIN] == * smiles: ** CC=C1(C(C)C(NC1=CC4(=C(C)C(CCC([O-])=O...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Metabolite]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-884 RXN0-884] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=3Z-PHYTOCHROMOBILIN 3Z-PHYTOCHROMOBILIN] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** CC=C1(C(C)C(NC1=CC4(=C(C)C(CCC([O-])=O)=C(C=C2(C(CCC([O-])=O)=C(C)C(=N2)C=C3(C(C)=C(C=C)C(=O)N3)))N4))=O)
 +
* inchi key:
 +
** InChIKey=DKMLMZVDTGOEGU-AIKFXVFZSA-L
 
* common name:
 
* common name:
−
** 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
+
** (3Z)-phytochromobilin
−
* ec number:
+
* molecular weight:
−
** [http://enzyme.expasy.org/EC/1.17.7.4 EC-1.17.7.4]
+
** 582.655   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
== Reaction(s) known to produce the compound ==
−
** 2 [[PROTON]][c] '''+''' 1 [[HYDROXY-METHYL-BUTENYL-DIP]][c] '''+''' 2 [[Reduced-ferredoxins]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[CPD-4211]][c] '''+''' 2 [[Oxidized-ferredoxins]][c]
+
* [[1.3.7.4-RXN]]
−
* With common name(s):
+
== Reaction(s) of unknown directionality ==
−
** 2 H+[c] '''+''' 1 (E)-4-hydroxy-3-methylbut-2-en-1-yl diphosphate[c] '''+''' 2 a reduced ferredoxin [iron-sulfur] cluster[c] '''=>''' 1 H2O[c] '''+''' 1 dimethylallyl diphosphate[c] '''+''' 2 an oxidized ferredoxin [iron-sulfur] cluster[c]
+
−
 
+
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Ec-06_002680]]
+
−
** ESILICULOSUS_GENOME
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY]
+
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560]
+
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[annotation]]
+
−
** Source: [[annotation-esiliculosus_genome]]
+
−
*** Tool: [[pathwaytools]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
* PUBCHEM:
−
** [http://www.genome.jp/dbget-bin/www_bget?R08210 R08210]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25246013 25246013]
−
** [http://www.genome.jp/dbget-bin/www_bget?R07219 R07219]
+
{{#set: smiles=CC=C1(C(C)C(NC1=CC4(=C(C)C(CCC([O-])=O)=C(C=C2(C(CCC([O-])=O)=C(C)C(=N2)C=C3(C(C)=C(C=C)C(=O)N3)))N4))=O)}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: inchi key=InChIKey=DKMLMZVDTGOEGU-AIKFXVFZSA-L}}
−
{{#set: common name=4-hydroxy-3-methylbut-2-enyl diphosphate reductase}}
+
{{#set: common name=(3Z)-phytochromobilin}}
−
{{#set: ec number=EC-1.17.7.4}}
+
{{#set: molecular weight=582.655    }}
−
{{#set: gene associated=Ec-06_002680}}
+
{{#set: produced by=1.3.7.4-RXN}}
−
{{#set: in pathway=NONMEVIPP-PWY|PWY-7560}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 13:55, 21 March 2018

Metabolite 3Z-PHYTOCHROMOBILIN

  • smiles:
    • CC=C1(C(C)C(NC1=CC4(=C(C)C(CCC([O-])=O)=C(C=C2(C(CCC([O-])=O)=C(C)C(=N2)C=C3(C(C)=C(C=C)C(=O)N3)))N4))=O)
  • inchi key:
    • InChIKey=DKMLMZVDTGOEGU-AIKFXVFZSA-L
  • common name:
    • (3Z)-phytochromobilin
  • molecular weight:
    • 582.655
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC=C1(C(C)C(NC1=CC4(=C(C)C(CCC([O-])=O)=C(C=C2(C(CCC([O-])=O)=C(C)C(=N2)C=C3(C(C)=C(C=C)C(=O)N3)))N4))=O)" cannot be used as a page name in this wiki.



Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=5.1.1.16-RXN&oldid=22798"