Difference between revisions of "6.3.5.7-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16628 RXN-16628] == * direction: ** LEFT-TO-RIGHT * common name: ** Glucose/ribitol dehydrogena...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAD-SYNTH-GLN-RXN NAD-SYNTH-GLN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Carbon-nitr...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NAD-SYNTH-GLN-RXN NAD-SYNTH-GLN-RXN] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
− | ** | + | ** Carbon-nitrogen hydrolase |
* ec number: | * ec number: | ||
− | ** [http://enzyme.expasy.org/EC/ | + | ** [http://enzyme.expasy.org/EC/6.3.5.1 EC-6.3.5.1] |
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[GLN]][c] '''+''' 1 [[DEAMIDO-NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[GLT]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 | + | ** 1 L-glutamine[c] '''+''' 1 nicotinate adenine dinucleotide[c] '''+''' 1 H2O[c] '''+''' 1 ATP[c] '''=>''' 1 H+[c] '''+''' 1 NAD+[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 L-glutamate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * [[Ec- | + | * Gene: [[Ec-14_000810]] |
− | ** | + | ** Source: [[annotation-esiliculosus_genome]] |
− | ***EC-NUMBER | + | *** Assignment: EC-NUMBER |
+ | ** Source: [[orthology-aragem]] | ||
== Pathways == | == Pathways == | ||
− | * [[PWY- | + | * [[PYRIDNUCSAL-PWY]], NAD salvage pathway I: [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSAL-PWY PYRIDNUCSAL-PWY] |
− | ** ''' | + | ** '''3''' reactions found over '''6''' reactions in the full pathway |
+ | * [[PWY-5653]], NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5653 PWY-5653] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PYRIDNUCSYN-PWY]], NAD biosynthesis I (from aspartate): [http://metacyc.org/META/NEW-IMAGE?object=PYRIDNUCSYN-PWY PYRIDNUCSYN-PWY] | ||
+ | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-5381]], pyridine nucleotide cycling (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5381 PWY-5381] | ||
+ | ** '''5''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-7761]], NAD salvage pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7761 PWY-7761] | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
+ | * Category: [[orthology]] | ||
+ | ** Source: [[orthology-aragem]] | ||
+ | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
** Source: [[annotation-esiliculosus_genome]] | ** Source: [[annotation-esiliculosus_genome]] | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24384 24384] | ||
+ | * LIGAND-RXN: | ||
+ | ** [http://www.genome.jp/dbget-bin/www_bget?R00257 R00257] | ||
+ | * UNIPROT: | ||
+ | ** [http://www.uniprot.org/uniprot/Q9PPB0 Q9PPB0] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9JTY7 Q9JTY7] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9CGJ4 Q9CGJ4] | ||
+ | ** [http://www.uniprot.org/uniprot/Q9Z4V9 Q9Z4V9] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
− | {{#set: common name= | + | {{#set: common name=Carbon-nitrogen hydrolase}} |
− | {{#set: ec number=EC- | + | {{#set: ec number=EC-6.3.5.1}} |
− | {{#set: gene associated=Ec- | + | {{#set: gene associated=Ec-14_000810}} |
− | {{#set: in pathway=PWY- | + | {{#set: in pathway=PYRIDNUCSAL-PWY|PWY-5653|PYRIDNUCSYN-PWY|PWY-5381|PWY-7761}} |
− | {{#set: reconstruction category=annotation}} | + | {{#set: reconstruction category=orthology|annotation}} |
− | {{#set: reconstruction source=annotation-esiliculosus_genome}} | + | {{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}} |
− | {{#set: reconstruction tool=pathwaytools}} | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
Revision as of 13:56, 21 March 2018
Contents
Reaction NAD-SYNTH-GLN-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- Carbon-nitrogen hydrolase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 L-glutamine[c] + 1 nicotinate adenine dinucleotide[c] + 1 H2O[c] + 1 ATP[c] => 1 H+[c] + 1 NAD+[c] + 1 AMP[c] + 1 diphosphate[c] + 1 L-glutamate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Ec-14_000810
- Source: annotation-esiliculosus_genome
- Assignment: EC-NUMBER
- Source: orthology-aragem
- Source: annotation-esiliculosus_genome
Pathways
- PYRIDNUCSAL-PWY, NAD salvage pathway I: PYRIDNUCSAL-PWY
- 3 reactions found over 6 reactions in the full pathway
- PWY-5653, NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde: PWY-5653
- 3 reactions found over 4 reactions in the full pathway
- PYRIDNUCSYN-PWY, NAD biosynthesis I (from aspartate): PYRIDNUCSYN-PWY
- 6 reactions found over 6 reactions in the full pathway
- PWY-5381, pyridine nucleotide cycling (plants): PWY-5381
- 5 reactions found over 11 reactions in the full pathway
- PWY-7761, NAD salvage pathway II: PWY-7761
- 2 reactions found over 4 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-aragem
- Tool: pantograph
- Source: orthology-aragem
- Category: annotation
- Source: annotation-esiliculosus_genome
- Tool: pathwaytools
- Source: annotation-esiliculosus_genome
External links