Difference between revisions of "SPERMINE"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HOMOGENTISATE HOMOGENTISATE] == * smiles: ** C1(C(=CC(=C(C=1)O)CC([O-])=O)O) * inchi key: ** In...")
(Created page with "Category:Gene == Gene Ec-12_003100 == * left end position: ** 2867120 * transcription direction: ** POSITIVE * right end position: ** 2877287 * centisome position: ** 34.3...")
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[[Category:Metabolite]]
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[[Category:Gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=HOMOGENTISATE HOMOGENTISATE] ==
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== Gene Ec-12_003100 ==
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* smiles:
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* left end position:
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** C1(C(=CC(=C(C=1)O)CC([O-])=O)O)
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** 2867120
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* inchi key:
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* transcription direction:
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** InChIKey=IGMNYECMUMZDDF-UHFFFAOYSA-M
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** POSITIVE
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* common name:
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* right end position:
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** homogentisate
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** 2877287
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* molecular weight:
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* centisome position:
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** 167.141    
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** 34.39422    
 
* Synonym(s):
 
* Synonym(s):
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** 2,5-dihydroxyphenylacetate
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** Esi_0264_0028
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** Esi0264_0028
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** CGL
  
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== Reaction(s) known to consume the compound ==
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== Reactions associated ==
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* [[HOMOGENTISATE-12-DIOXYGENASE-RXN]]
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* Reaction: [[CYSTHIOCYS-RXN]]
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* [[RXN-2541]]
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** Source: [[annotation-esiliculosus_genome]]
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== Reaction(s) known to produce the compound ==
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*** Assignment: ec-number
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* [[4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN]]
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* Reaction: [[HOMOSERDEAM-RXN]]
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== Reaction(s) of unknown directionality ==
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[LCYSDESULF-RXN]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[METBALT-RXN]]
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** Source: [[orthology-aragem]]
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* Reaction: [[O-SUCCHOMOSERLYASE-RXN]]
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** Source: [[orthology-aragem]]
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* Reaction: [[RXN-14048]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-14049]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-15128]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-15129]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[RXN-15130]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: ec-number
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* Reaction: [[SULFOCYS-RXN]]
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** Source: [[orthology-aragem]]
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== Pathways associated ==
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* [[HOMOCYSDEGR-PWY]]
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* [[HOMOSER-METSYN-PWY]]
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* [[PWY-801]]
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* [[LCYSDEG-PWY]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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{{#set: left end position=2867120}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=5460389 5460389]
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{{#set: transcription direction=POSITIVE}}
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* HMDB : HMDB00130
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{{#set: right end position=2877287}}
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* LIGAND-CPD:
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{{#set: centisome position=34.39422   }}
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** [http://www.genome.jp/dbget-bin/www_bget?C00544 C00544]
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{{#set: common name=Esi_0264_0028|Esi0264_0028|CGL}}
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* CHEMSPIDER:
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{{#set: reaction associated=CYSTHIOCYS-RXN|HOMOSERDEAM-RXN|LCYSDESULF-RXN|METBALT-RXN|O-SUCCHOMOSERLYASE-RXN|RXN-14048|RXN-14049|RXN-15128|RXN-15129|RXN-15130|SULFOCYS-RXN}}
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** [http://www.chemspider.com/Chemical-Structure.4573931.html 4573931]
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{{#set: pathway associated=HOMOCYSDEGR-PWY|HOMOSER-METSYN-PWY|PWY-801|LCYSDEG-PWY}}
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=16169 16169]
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* METABOLIGHTS : MTBLC16169
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{{#set: smiles=C1(C(=CC(=C(C=1)O)CC([O-])=O)O)}}
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{{#set: inchi key=InChIKey=IGMNYECMUMZDDF-UHFFFAOYSA-M}}
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{{#set: common name=homogentisate}}
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−
{{#set: molecular weight=167.141   }}
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{{#set: common name=2,5-dihydroxyphenylacetate}}
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{{#set: consumed by=HOMOGENTISATE-12-DIOXYGENASE-RXN|RXN-2541}}
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{{#set: produced by=4-HYDROXYPHENYLPYRUVATE-DIOXYGENASE-RXN}}
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Revision as of 13:56, 21 March 2018

Gene Ec-12_003100

  • left end position:
    • 2867120
  • transcription direction:
    • POSITIVE
  • right end position:
    • 2877287
  • centisome position:
    • 34.39422
  • Synonym(s):
    • Esi_0264_0028
    • Esi0264_0028
    • CGL

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=SPERMINE&oldid=23000"