Difference between revisions of "RXN-11999"

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(Created page with "Category:Gene == Gene Ec-04_001890 == * Synonym(s): ** Esi_0015_0097 ** Esi0015_0097 == Reactions associated == * RXN-8443 ** pantograph-aragem == Pathways as...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SAMDECARB-RXN SAMDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** S-adenosylmethionin...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Ec-04_001890 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SAMDECARB-RXN SAMDECARB-RXN] ==
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* direction:
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** LEFT-TO-RIGHT
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* common name:
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** S-adenosylmethionine decarboxylase subgroup
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** S-Adenosylmethionine decarboxylase
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* ec number:
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** [http://enzyme.expasy.org/EC/4.1.1.50 EC-4.1.1.50]
 
* Synonym(s):
 
* Synonym(s):
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** Esi_0015_0097
 
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** Esi0015_0097
 
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[RXN-8443]]
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* With identifiers:
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** [[pantograph]]-[[aragem]]
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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== Pathways associated ==
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* With common name(s):
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* [[PWY-5381]]
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 H+[c] '''=>''' 1 S-adenosyl 3-(methylthio)propylamine[c] '''+''' 1 CO2[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Ec-22_002520]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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* Gene: [[Ec-27_006890]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-aragem]]
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== Pathways ==
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* [[BSUBPOLYAMSYN-PWY]], spermidine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=BSUBPOLYAMSYN-PWY BSUBPOLYAMSYN-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[ARGSPECAT-PWY]], spermine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=ARGSPECAT-PWY ARGSPECAT-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6834]], spermidine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6834 PWY-6834]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-aragem]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-esiliculosus_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: common name=Esi_0015_0097|Esi0015_0097}}
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* RHEA:
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{{#set: reaction associated=RXN-8443}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15981 15981]
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{{#set: pathway associated=PWY-5381}}
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00178 R00178]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/P82184 P82184]
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** [http://www.uniprot.org/uniprot/P21182 P21182]
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** [http://www.uniprot.org/uniprot/P0A7F6 P0A7F6]
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** [http://www.uniprot.org/uniprot/P17707 P17707]
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** [http://www.uniprot.org/uniprot/P28918 P28918]
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** [http://www.uniprot.org/uniprot/P17708 P17708]
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** [http://www.uniprot.org/uniprot/P50243 P50243]
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** [http://www.uniprot.org/uniprot/P46255 P46255]
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** [http://www.uniprot.org/uniprot/Q04694 Q04694]
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** [http://www.uniprot.org/uniprot/Q42679 Q42679]
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** [http://www.uniprot.org/uniprot/Q42829 Q42829]
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** [http://www.uniprot.org/uniprot/P79888 P79888]
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** [http://www.uniprot.org/uniprot/O04009 O04009]
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** [http://www.uniprot.org/uniprot/O24575 O24575]
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** [http://www.uniprot.org/uniprot/Q43820 Q43820]
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** [http://www.uniprot.org/uniprot/Q39676 Q39676]
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** [http://www.uniprot.org/uniprot/Q39677 Q39677]
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** [http://www.uniprot.org/uniprot/O49972 O49972]
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** [http://www.uniprot.org/uniprot/O65354 O65354]
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** [http://www.uniprot.org/uniprot/O02655 O02655]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=S-adenosylmethionine decarboxylase subgroup}}
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{{#set: common name=S-Adenosylmethionine decarboxylase}}
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{{#set: ec number=EC-4.1.1.50}}
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{{#set: gene associated=Ec-22_002520|Ec-27_006890}}
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{{#set: in pathway=BSUBPOLYAMSYN-PWY|ARGSPECAT-PWY|PWY-6834}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome|orthology-aragem}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 13:57, 21 March 2018

Reaction SAMDECARB-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • S-adenosylmethionine decarboxylase subgroup
    • S-Adenosylmethionine decarboxylase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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